Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 AC026410.3-201ENST00000514280 936 ntBASIC13.93□□□□□ -0.18
TNFRSF1BP20333 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 AC104794.3-201ENST00000566840 1248 ntBASIC13.93□□□□□ -0.18
TNFRSF1BP20333 AL662799.1-202ENST00000614205 422 ntBASIC13.93□□□□□ -0.18
TNFRSF1BP20333 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 MIR1233-2-201ENST00000408138 82 ntBASIC13.92□□□□□ -0.18
TNFRSF1BP20333 MIR1233-1-201ENST00000408722 82 ntBASIC13.92□□□□□ -0.18
TNFRSF1BP20333 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.92□□□□□ -0.18
TNFRSF1BP20333 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 AC067863.1-201ENST00000494933 530 ntBASIC13.92□□□□□ -0.18
TNFRSF1BP20333 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 AC036164.1-201ENST00000570544 333 ntBASIC13.92□□□□□ -0.18
TNFRSF1BP20333 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 MBLAC2-202ENST00000514906 1936 ntBASIC13.92□□□□□ -0.18
TNFRSF1BP20333 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFRSF1BP20333 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 AC016397.2-201ENST00000624848 1985 ntBASIC13.91□□□□□ -0.18
TNFRSF1BP20333 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 AC023310.3-201ENST00000557027 670 ntBASIC13.91□□□□□ -0.18
TNFRSF1BP20333 AC100756.1-201ENST00000562736 682 ntBASIC13.91□□□□□ -0.18
TNFRSF1BP20333 AC138749.3-201ENST00000567691 622 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms