Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.83□□□□□ -0.2
PRKCDQ05655 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.83□□□□□ -0.2
PRKCDQ05655 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCDQ05655 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.83□□□□□ -0.2
PRKCDQ05655 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCDQ05655 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCDQ05655 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
PRKCDQ05655 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCDQ05655 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PRKCDQ05655 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCDQ05655 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCDQ05655 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCDQ05655 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.83□□□□□ -0.2
PRKCDQ05655 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.83□□□□□ -0.2
PRKCDQ05655 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.83□□□□□ -0.2
PRKCDQ05655 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.83□□□□□ -0.2
PRKCDQ05655 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.83□□□□□ -0.2
PRKCDQ05655 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.83□□□□□ -0.2
PRKCDQ05655 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.83□□□□□ -0.2
PRKCDQ05655 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
PRKCDQ05655 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
PRKCDQ05655 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCDQ05655 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCDQ05655 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PRKCDQ05655 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCDQ05655 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCDQ05655 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCDQ05655 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.83□□□□□ -0.2
PRKCDQ05655 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.83□□□□□ -0.2
PRKCDQ05655 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.83□□□□□ -0.2
PRKCDQ05655 AC093525.8-201ENST00000624099 1342 ntBASIC13.83□□□□□ -0.2
PRKCDQ05655 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCDQ05655 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCDQ05655 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
PRKCDQ05655 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PRKCDQ05655 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCDQ05655 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PRKCDQ05655 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
PRKCDQ05655 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCDQ05655 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCDQ05655 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCDQ05655 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
PRKCDQ05655 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.82□□□□□ -0.2
PRKCDQ05655 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
PRKCDQ05655 CLK3P2-201ENST00000427566 1453 ntBASIC13.82□□□□□ -0.2
PRKCDQ05655 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.82□□□□□ -0.2
PRKCDQ05655 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PRKCDQ05655 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
PRKCDQ05655 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
PRKCDQ05655 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.82□□□□□ -0.2
PRKCDQ05655 MIR943-201ENST00000401286 94 ntBASIC13.82□□□□□ -0.2
PRKCDQ05655 MIR1233-2-201ENST00000408138 82 ntBASIC13.82□□□□□ -0.2
PRKCDQ05655 MIR1233-1-201ENST00000408722 82 ntBASIC13.82□□□□□ -0.2
PRKCDQ05655 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.82□□□□□ -0.2
PRKCDQ05655 AC009407.1-201ENST00000568958 598 ntBASIC13.82□□□□□ -0.2
PRKCDQ05655 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.82□□□□□ -0.2
PRKCDQ05655 SRD5A3P1-201ENST00000603021 949 ntBASIC13.82□□□□□ -0.2
PRKCDQ05655 AL691403.2-201ENST00000618460 490 ntBASIC13.82□□□□□ -0.2
PRKCDQ05655 AC093028.1-201ENST00000622998 982 ntBASIC13.82□□□□□ -0.2
PRKCDQ05655 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.82□□□□□ -0.2
PRKCDQ05655 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PRKCDQ05655 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.82□□□□□ -0.2
PRKCDQ05655 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.82□□□□□ -0.2
PRKCDQ05655 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.82□□□□□ -0.2
PRKCDQ05655 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.82□□□□□ -0.2
PRKCDQ05655 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.82□□□□□ -0.2
PRKCDQ05655 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.82□□□□□ -0.2
PRKCDQ05655 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.82□□□□□ -0.2
PRKCDQ05655 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCDQ05655 DRD5P1-201ENST00000456605 1438 ntBASIC13.81□□□□□ -0.2
PRKCDQ05655 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.81□□□□□ -0.2
PRKCDQ05655 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
PRKCDQ05655 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.81□□□□□ -0.2
PRKCDQ05655 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms