Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CLDN12P56749 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN12P56749 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN12P56749 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.07□□□□□ -0.32
CLDN12P56749 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.06□□□□□ -0.32
CLDN12P56749 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CLDN12P56749 AL137783.1-201ENST00000623494 1896 ntBASIC13.06□□□□□ -0.32
CLDN12P56749 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CLDN12P56749 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.06□□□□□ -0.32
CLDN12P56749 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CLDN12P56749 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.06□□□□□ -0.32
CLDN12P56749 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CLDN12P56749 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.06□□□□□ -0.32
CLDN12P56749 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.06□□□□□ -0.32
CLDN12P56749 AL080243.2-201ENST00000418783 582 ntBASIC13.06□□□□□ -0.32
CLDN12P56749 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.06□□□□□ -0.32
CLDN12P56749 GPS2P2-201ENST00000430745 888 ntBASIC13.06□□□□□ -0.32
CLDN12P56749 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.06□□□□□ -0.32
CLDN12P56749 AC026150.2-201ENST00000564693 1156 ntBASIC13.06□□□□□ -0.32
CLDN12P56749 AC040169.1-201ENST00000565382 521 ntBASIC13.06□□□□□ -0.32
CLDN12P56749 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.06□□□□□ -0.32
CLDN12P56749 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.06□□□□□ -0.32
CLDN12P56749 BX640515.1-201ENST00000617215 977 ntBASIC13.06□□□□□ -0.32
CLDN12P56749 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.06□□□□□ -0.32
CLDN12P56749 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.06□□□□□ -0.32
CLDN12P56749 AL033527.5-202ENST00000641632 1098 ntBASIC13.06□□□□□ -0.32
CLDN12P56749 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CLDN12P56749 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.06□□□□□ -0.32
CLDN12P56749 AC090505.1-201ENST00000430515 1834 ntBASIC13.06□□□□□ -0.32
CLDN12P56749 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CLDN12P56749 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
CLDN12P56749 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
CLDN12P56749 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CLDN12P56749 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.06□□□□□ -0.32
CLDN12P56749 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
CLDN12P56749 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN12P56749 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.06□□□□□ -0.32
CLDN12P56749 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CLDN12P56749 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CLDN12P56749 KRT8P22-201ENST00000562317 1415 ntBASIC13.05□□□□□ -0.32
CLDN12P56749 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN12P56749 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.05□□□□□ -0.32
CLDN12P56749 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CLDN12P56749 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.05□□□□□ -0.32
CLDN12P56749 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CLDN12P56749 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN12P56749 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CLDN12P56749 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CLDN12P56749 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
CLDN12P56749 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 AL627223.1-201ENST00000416693 442 ntBASIC13.05□□□□□ -0.32
CLDN12P56749 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.05□□□□□ -0.32
CLDN12P56749 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms