Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.05□□□□□ -0.32
ATP1B3P54709 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.05□□□□□ -0.32
ATP1B3P54709 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.05□□□□□ -0.32
ATP1B3P54709 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.05□□□□□ -0.32
ATP1B3P54709 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.05□□□□□ -0.32
ATP1B3P54709 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.05□□□□□ -0.32
ATP1B3P54709 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.05□□□□□ -0.32
ATP1B3P54709 DUX4L27-201ENST00000554796 1261 ntBASIC13.05□□□□□ -0.32
ATP1B3P54709 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.05□□□□□ -0.32
ATP1B3P54709 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.05□□□□□ -0.32
ATP1B3P54709 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.05□□□□□ -0.32
ATP1B3P54709 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.05□□□□□ -0.32
ATP1B3P54709 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.05□□□□□ -0.32
ATP1B3P54709 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
ATP1B3P54709 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.05□□□□□ -0.32
ATP1B3P54709 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
ATP1B3P54709 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.05□□□□□ -0.32
ATP1B3P54709 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.05□□□□□ -0.32
ATP1B3P54709 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.05□□□□□ -0.32
ATP1B3P54709 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
ATP1B3P54709 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
ATP1B3P54709 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.05□□□□□ -0.32
ATP1B3P54709 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
ATP1B3P54709 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
ATP1B3P54709 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.05□□□□□ -0.32
ATP1B3P54709 AC018529.2-202ENST00000611482 3087 ntBASIC13.04□□□□□ -0.32
ATP1B3P54709 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.04□□□□□ -0.32
ATP1B3P54709 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
ATP1B3P54709 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
ATP1B3P54709 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 AC022144.1-201ENST00000602255 1580 ntBASIC13.04□□□□□ -0.32
ATP1B3P54709 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.04□□□□□ -0.32
ATP1B3P54709 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
ATP1B3P54709 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
ATP1B3P54709 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.04□□□□□ -0.32
ATP1B3P54709 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
ATP1B3P54709 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.04□□□□□ -0.32
ATP1B3P54709 AL645937.2-201ENST00000396808 931 ntBASIC13.04□□□□□ -0.32
ATP1B3P54709 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.04□□□□□ -0.32
ATP1B3P54709 AC055876.3-201ENST00000431496 288 ntBASIC13.04□□□□□ -0.32
ATP1B3P54709 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
ATP1B3P54709 FAM86LP-201ENST00000478302 853 ntBASIC13.04□□□□□ -0.32
ATP1B3P54709 RPL13AP25-201ENST00000484130 612 ntBASIC13.04□□□□□ -0.32
ATP1B3P54709 GAPDHP40-201ENST00000505218 1006 ntBASIC13.04□□□□□ -0.32
ATP1B3P54709 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.04□□□□□ -0.32
ATP1B3P54709 RARRES2P5-201ENST00000564013 466 ntBASIC13.04□□□□□ -0.32
ATP1B3P54709 AC009407.1-201ENST00000568958 598 ntBASIC13.04□□□□□ -0.32
ATP1B3P54709 AC138649.4-201ENST00000612222 287 ntBASIC13.04□□□□□ -0.32
ATP1B3P54709 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.04□□□□□ -0.32
ATP1B3P54709 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.04□□□□□ -0.32
ATP1B3P54709 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.04□□□□□ -0.32
ATP1B3P54709 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
ATP1B3P54709 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ATP1B3P54709 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.04□□□□□ -0.32
ATP1B3P54709 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
ATP1B3P54709 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
ATP1B3P54709 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.04□□□□□ -0.32
ATP1B3P54709 AC092135.3-201ENST00000624151 1846 ntBASIC13.04□□□□□ -0.32
ATP1B3P54709 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.04□□□□□ -0.32
ATP1B3P54709 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.04□□□□□ -0.32
ATP1B3P54709 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 CLK3P2-201ENST00000427566 1453 ntBASIC13.04□□□□□ -0.32
ATP1B3P54709 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATP1B3P54709 MTHFR-210ENST00000641407 2387 ntBASIC13.03□□□□□ -0.32
ATP1B3P54709 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.03□□□□□ -0.32
ATP1B3P54709 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms