Protein–RNA interactions for Protein: Q8TCX1

DYNC2LI1, Cytoplasmic dynein 2 light intermediate chain 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DYNC2LI1Q8TCX1 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DYNC2LI1Q8TCX1 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.23□□□□□ -0.29
DYNC2LI1Q8TCX1 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
DYNC2LI1Q8TCX1 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
DYNC2LI1Q8TCX1 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
DYNC2LI1Q8TCX1 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
DYNC2LI1Q8TCX1 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
DYNC2LI1Q8TCX1 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
DYNC2LI1Q8TCX1 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DYNC2LI1Q8TCX1 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DYNC2LI1Q8TCX1 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DYNC2LI1Q8TCX1 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 HIST3H2BA-201ENST00000436555 524 ntBASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 VN2R19P-201ENST00000442399 1052 ntBASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 AC107375.1-201ENST00000564464 2231 ntBASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DYNC2LI1Q8TCX1 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 IER3-202ENST00000376377 1350 ntBASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 KRT8P35-201ENST00000483942 1338 ntBASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 ATP5G2P1-201ENST00000433580 426 ntBASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 AC012640.2-201ENST00000561606 901 ntBASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 AC023141.13-201ENST00000604991 943 ntBASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 Z98257.2-202ENST00000641138 1548 ntBASIC13.21□□□□□ -0.29
DYNC2LI1Q8TCX1 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms