Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RP1L1Q8IWN7 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RP1L1Q8IWN7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RP1L1Q8IWN7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RP1L1Q8IWN7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RP1L1Q8IWN7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.6□□□□□ -0.23
RP1L1Q8IWN7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
RP1L1Q8IWN7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RP1L1Q8IWN7 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.6□□□□□ -0.23
RP1L1Q8IWN7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RP1L1Q8IWN7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.6□□□□□ -0.23
RP1L1Q8IWN7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RP1L1Q8IWN7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RP1L1Q8IWN7 AC084364.1-201ENST00000551967 1556 ntBASIC13.6□□□□□ -0.23
RP1L1Q8IWN7 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 POU5F1P2-201ENST00000521750 823 ntBASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 CICP11-201ENST00000434745 2827 ntBASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 ACTBP8-201ENST00000403258 1108 ntBASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RP1L1Q8IWN7 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.23
RP1L1Q8IWN7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
RP1L1Q8IWN7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
RP1L1Q8IWN7 FGFR3P1-201ENST00000449999 601 ntBASIC13.58□□□□□ -0.23
RP1L1Q8IWN7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.58□□□□□ -0.23
RP1L1Q8IWN7 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.58□□□□□ -0.23
RP1L1Q8IWN7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.58□□□□□ -0.23
RP1L1Q8IWN7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
RP1L1Q8IWN7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RP1L1Q8IWN7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RP1L1Q8IWN7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RP1L1Q8IWN7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.58□□□□□ -0.23
RP1L1Q8IWN7 SPATA18-201ENST00000295213 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RP1L1Q8IWN7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RP1L1Q8IWN7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.58□□□□□ -0.23
RP1L1Q8IWN7 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.58□□□□□ -0.23
RP1L1Q8IWN7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RP1L1Q8IWN7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
RP1L1Q8IWN7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RP1L1Q8IWN7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RP1L1Q8IWN7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RP1L1Q8IWN7 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
RP1L1Q8IWN7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.58□□□□□ -0.24
RP1L1Q8IWN7 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
RP1L1Q8IWN7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RP1L1Q8IWN7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RP1L1Q8IWN7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RP1L1Q8IWN7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.58□□□□□ -0.24
RP1L1Q8IWN7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RP1L1Q8IWN7 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RP1L1Q8IWN7 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.58□□□□□ -0.24
RP1L1Q8IWN7 AL645937.2-201ENST00000396808 931 ntBASIC13.58□□□□□ -0.24
RP1L1Q8IWN7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.58□□□□□ -0.24
RP1L1Q8IWN7 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.58□□□□□ -0.24
RP1L1Q8IWN7 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms