Protein–RNA interactions for Protein: Q6XYD6

BRD3OS, BRD3 opposite strand, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3OSQ6XYD6 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 AC100827.2-201ENST00000563214 1194 ntBASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 NDUFV2P1-201ENST00000596415 907 ntBASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 AC138649.2-201ENST00000615886 705 ntBASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 E2F3P2-201ENST00000447755 1422 ntBASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
BRD3OSQ6XYD6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 SALL4P5-201ENST00000419001 1760 ntBASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 SHC1P1-201ENST00000425230 1745 ntBASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 AL138725.1-201ENST00000407347 1314 ntBASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BRD3OSQ6XYD6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
BRD3OSQ6XYD6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.09□□□□□ -0.47
BRD3OSQ6XYD6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.09□□□□□ -0.47
BRD3OSQ6XYD6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
BRD3OSQ6XYD6 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.09□□□□□ -0.47
BRD3OSQ6XYD6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.09□□□□□ -0.47
BRD3OSQ6XYD6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BRD3OSQ6XYD6 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
BRD3OSQ6XYD6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BRD3OSQ6XYD6 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BRD3OSQ6XYD6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BRD3OSQ6XYD6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms