Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SCN1BQ07699 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
SCN1BQ07699 KRT18P32-201ENST00000424695 1287 ntBASIC13.43□□□□□ -0.26
SCN1BQ07699 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SCN1BQ07699 DNAJB3-201ENST00000446806 729 ntBASIC13.43□□□□□ -0.26
SCN1BQ07699 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SCN1BQ07699 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.43□□□□□ -0.26
SCN1BQ07699 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SCN1BQ07699 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.43□□□□□ -0.26
SCN1BQ07699 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.43□□□□□ -0.26
SCN1BQ07699 KRT8P24-201ENST00000560290 1559 ntBASIC13.43□□□□□ -0.26
SCN1BQ07699 RARRES2P9-201ENST00000565168 469 ntBASIC13.43□□□□□ -0.26
SCN1BQ07699 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.43□□□□□ -0.26
SCN1BQ07699 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.43□□□□□ -0.26
SCN1BQ07699 MIR4469-201ENST00000583919 79 ntBASIC13.43□□□□□ -0.26
SCN1BQ07699 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SCN1BQ07699 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.43□□□□□ -0.26
SCN1BQ07699 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.43□□□□□ -0.26
SCN1BQ07699 AL450472.2-201ENST00000603663 1156 ntBASIC13.43□□□□□ -0.26
SCN1BQ07699 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
SCN1BQ07699 AC003101.2-201ENST00000612557 442 ntBASIC13.43□□□□□ -0.26
SCN1BQ07699 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.43□□□□□ -0.26
SCN1BQ07699 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SCN1BQ07699 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.43□□□□□ -0.26
SCN1BQ07699 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SCN1BQ07699 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
SCN1BQ07699 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SCN1BQ07699 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
SCN1BQ07699 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SCN1BQ07699 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SCN1BQ07699 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SCN1BQ07699 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.43□□□□□ -0.26
SCN1BQ07699 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SCN1BQ07699 AC083964.2-201ENST00000623988 2396 ntBASIC13.43□□□□□ -0.26
SCN1BQ07699 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SCN1BQ07699 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SCN1BQ07699 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SCN1BQ07699 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
SCN1BQ07699 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SCN1BQ07699 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.43□□□□□ -0.26
SCN1BQ07699 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SCN1BQ07699 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SCN1BQ07699 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.42□□□□□ -0.26
SCN1BQ07699 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SCN1BQ07699 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
SCN1BQ07699 AP000845.1-201ENST00000581677 2131 ntBASIC13.42□□□□□ -0.26
SCN1BQ07699 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.42□□□□□ -0.26
SCN1BQ07699 CYP4F24P-201ENST00000586049 1580 ntBASIC13.42□□□□□ -0.26
SCN1BQ07699 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SCN1BQ07699 AC004899.2-201ENST00000622993 3860 ntBASIC13.42□□□□□ -0.26
SCN1BQ07699 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 KRT8P37-201ENST00000451609 1420 ntBASIC13.42□□□□□ -0.26
SCN1BQ07699 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
SCN1BQ07699 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.42□□□□□ -0.26
SCN1BQ07699 RPS8P6-201ENST00000426177 609 ntBASIC13.42□□□□□ -0.26
SCN1BQ07699 AP000347.1-202ENST00000435868 847 ntBASIC13.42□□□□□ -0.26
SCN1BQ07699 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
SCN1BQ07699 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SCN1BQ07699 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SCN1BQ07699 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.42□□□□□ -0.26
SCN1BQ07699 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.42□□□□□ -0.26
SCN1BQ07699 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
SCN1BQ07699 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.42□□□□□ -0.26
SCN1BQ07699 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.42□□□□□ -0.26
SCN1BQ07699 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.42□□□□□ -0.26
SCN1BQ07699 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.42□□□□□ -0.26
SCN1BQ07699 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SCN1BQ07699 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.42□□□□□ -0.26
SCN1BQ07699 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.42□□□□□ -0.26
SCN1BQ07699 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 AC073548.1-201ENST00000624088 1882 ntBASIC13.42□□□□□ -0.26
SCN1BQ07699 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCN1BQ07699 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.42□□□□□ -0.26
SCN1BQ07699 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.41□□□□□ -0.26
SCN1BQ07699 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.41□□□□□ -0.26
SCN1BQ07699 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.41□□□□□ -0.26
SCN1BQ07699 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 KRT8P22-201ENST00000562317 1415 ntBASIC13.41□□□□□ -0.26
SCN1BQ07699 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.41□□□□□ -0.26
SCN1BQ07699 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms