Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
UBE2D3P61077 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D3P61077 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D3P61077 SUN1-204ENST00000403868 978 ntTSL 2 BASIC10.73□□□□□ -0.69
UBE2D3P61077 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC10.73□□□□□ -0.69
UBE2D3P61077 TREML5P-201ENST00000421694 576 ntBASIC10.73□□□□□ -0.69
UBE2D3P61077 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC10.73□□□□□ -0.69
UBE2D3P61077 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC10.73□□□□□ -0.69
UBE2D3P61077 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC10.73□□□□□ -0.69
UBE2D3P61077 MEIS3P1-201ENST00000495167 958 ntBASIC10.73□□□□□ -0.69
UBE2D3P61077 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D3P61077 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC10.73□□□□□ -0.69
UBE2D3P61077 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC10.73□□□□□ -0.69
UBE2D3P61077 RAB35-202ENST00000534951 939 ntTSL 2 BASIC10.73□□□□□ -0.69
UBE2D3P61077 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
UBE2D3P61077 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC10.73□□□□□ -0.69
UBE2D3P61077 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC10.73□□□□□ -0.69
UBE2D3P61077 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC10.73□□□□□ -0.69
UBE2D3P61077 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC10.73□□□□□ -0.69
UBE2D3P61077 AL590560.3-201ENST00000623350 461 ntBASIC10.73□□□□□ -0.69
UBE2D3P61077 AL158212.4-201ENST00000624062 1286 ntBASIC10.73□□□□□ -0.69
UBE2D3P61077 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC10.73□□□□□ -0.69
UBE2D3P61077 AL360270.3-201ENST00000609118 1348 ntBASIC10.73□□□□□ -0.69
UBE2D3P61077 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D3P61077 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D3P61077 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC10.73□□□□□ -0.69
UBE2D3P61077 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D3P61077 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D3P61077 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC10.73□□□□□ -0.69
UBE2D3P61077 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D3P61077 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D3P61077 BTBD7P1-201ENST00000447253 1453 ntBASIC10.73□□□□□ -0.69
UBE2D3P61077 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
UBE2D3P61077 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
UBE2D3P61077 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
UBE2D3P61077 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC10.73□□□□□ -0.69
UBE2D3P61077 MTHFR-210ENST00000641407 2387 ntBASIC10.73□□□□□ -0.69
UBE2D3P61077 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D3P61077 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D3P61077 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D3P61077 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
UBE2D3P61077 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
UBE2D3P61077 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC10.72□□□□□ -0.69
UBE2D3P61077 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
UBE2D3P61077 AC018529.2-202ENST00000611482 3087 ntBASIC10.72□□□□□ -0.69
UBE2D3P61077 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
UBE2D3P61077 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC10.72□□□□□ -0.69
UBE2D3P61077 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC10.72□□□□□ -0.69
UBE2D3P61077 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
UBE2D3P61077 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
UBE2D3P61077 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC10.72□□□□□ -0.69
UBE2D3P61077 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2D3P61077 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC10.72□□□□□ -0.69
UBE2D3P61077 AC241585.1-201ENST00000433527 519 ntBASIC10.72□□□□□ -0.69
UBE2D3P61077 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2D3P61077 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC10.72□□□□□ -0.69
UBE2D3P61077 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC10.72□□□□□ -0.69
UBE2D3P61077 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC10.72□□□□□ -0.69
UBE2D3P61077 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC10.72□□□□□ -0.69
UBE2D3P61077 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 GPX4-206ENST00000588919 803 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2D3P61077 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
UBE2D3P61077 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC10.72□□□□□ -0.69
UBE2D3P61077 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC10.72□□□□□ -0.69
UBE2D3P61077 AL691403.2-201ENST00000618460 490 ntBASIC10.72□□□□□ -0.69
UBE2D3P61077 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC10.72□□□□□ -0.69
UBE2D3P61077 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC10.72□□□□□ -0.69
UBE2D3P61077 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 PID1-202ENST00000392054 2745 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2D3P61077 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
UBE2D3P61077 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
UBE2D3P61077 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D3P61077 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms