Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 CYP2AB1P-202ENST00000454440 1456 ntBASIC9.59□□□□□ -0.87
UBE2AP49459 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 KRT18P28-201ENST00000453838 1332 ntBASIC9.58□□□□□ -0.88
UBE2AP49459 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
UBE2AP49459 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
UBE2AP49459 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
UBE2AP49459 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC9.58□□□□□ -0.88
UBE2AP49459 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
UBE2AP49459 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
UBE2AP49459 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
UBE2AP49459 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
UBE2AP49459 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC9.58□□□□□ -0.88
UBE2AP49459 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC9.58□□□□□ -0.88
UBE2AP49459 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 AL139400.1-201ENST00000366220 510 ntBASIC9.58□□□□□ -0.88
UBE2AP49459 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
UBE2AP49459 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
UBE2AP49459 HLA-DRB6-201ENST00000411500 1235 ntBASIC9.58□□□□□ -0.88
UBE2AP49459 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC9.58□□□□□ -0.88
UBE2AP49459 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC9.58□□□□□ -0.88
UBE2AP49459 PON3-203ENST00000427422 894 ntTSL 3 BASIC9.58□□□□□ -0.88
UBE2AP49459 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC9.58□□□□□ -0.88
UBE2AP49459 AC241585.1-201ENST00000433527 519 ntBASIC9.58□□□□□ -0.88
UBE2AP49459 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC9.58□□□□□ -0.88
UBE2AP49459 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC9.58□□□□□ -0.88
UBE2AP49459 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC9.58□□□□□ -0.88
UBE2AP49459 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC9.58□□□□□ -0.88
UBE2AP49459 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC9.58□□□□□ -0.88
UBE2AP49459 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
UBE2AP49459 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC9.58□□□□□ -0.88
UBE2AP49459 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
UBE2AP49459 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC9.58□□□□□ -0.88
UBE2AP49459 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC9.58□□□□□ -0.88
UBE2AP49459 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC9.58□□□□□ -0.88
UBE2AP49459 AC010336.2-201ENST00000564226 506 ntBASIC9.58□□□□□ -0.88
UBE2AP49459 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC9.58□□□□□ -0.88
UBE2AP49459 UBL5-208ENST00000593087 320 ntTSL 3 BASIC9.58□□□□□ -0.88
UBE2AP49459 AP001160.2-201ENST00000596071 487 ntBASIC9.58□□□□□ -0.88
UBE2AP49459 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC9.58□□□□□ -0.88
UBE2AP49459 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC9.58□□□□□ -0.88
UBE2AP49459 AF228730.6-201ENST00000641497 218 ntBASIC9.58□□□□□ -0.88
UBE2AP49459 AC084121.3-201ENST00000641716 218 ntBASIC9.58□□□□□ -0.88
UBE2AP49459 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
UBE2AP49459 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC9.58□□□□□ -0.88
UBE2AP49459 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC9.58□□□□□ -0.88
UBE2AP49459 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC9.58□□□□□ -0.88
UBE2AP49459 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 AC013726.1-201ENST00000563747 2285 ntBASIC9.58□□□□□ -0.88
UBE2AP49459 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC9.58□□□□□ -0.88
UBE2AP49459 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 AC138969.3-201ENST00000546612 1459 ntBASIC9.58□□□□□ -0.88
UBE2AP49459 AC138932.2-201ENST00000548268 1459 ntBASIC9.58□□□□□ -0.88
UBE2AP49459 AC126755.4-201ENST00000549796 1459 ntBASIC9.58□□□□□ -0.88
UBE2AP49459 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
UBE2AP49459 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE2AP49459 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms