Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
TNFSF4P23510 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
TNFSF4P23510 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 AL157414.3-201ENST00000624276 1954 ntBASIC12.87□□□□□ -0.35
TNFSF4P23510 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TNFSF4P23510 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.87□□□□□ -0.35
TNFSF4P23510 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.87□□□□□ -0.35
TNFSF4P23510 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TNFSF4P23510 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TNFSF4P23510 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.86□□□□□ -0.35
TNFSF4P23510 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.86□□□□□ -0.35
TNFSF4P23510 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.86□□□□□ -0.35
TNFSF4P23510 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TNFSF4P23510 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.86□□□□□ -0.35
TNFSF4P23510 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.86□□□□□ -0.35
TNFSF4P23510 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.86□□□□□ -0.35
TNFSF4P23510 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 ACA64.2-201ENST00000459014 129 ntBASIC12.86□□□□□ -0.35
TNFSF4P23510 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.86□□□□□ -0.35
TNFSF4P23510 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.86□□□□□ -0.35
TNFSF4P23510 RNA5SP486-201ENST00000515961 83 ntBASIC12.86□□□□□ -0.35
TNFSF4P23510 IGHV3-71-201ENST00000523324 359 ntBASIC12.86□□□□□ -0.35
TNFSF4P23510 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.86□□□□□ -0.35
TNFSF4P23510 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.86□□□□□ -0.35
TNFSF4P23510 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.86□□□□□ -0.35
TNFSF4P23510 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.86□□□□□ -0.35
TNFSF4P23510 AL512343.1-201ENST00000605837 169 ntBASIC12.86□□□□□ -0.35
TNFSF4P23510 AC133552.6-201ENST00000613406 534 ntBASIC12.86□□□□□ -0.35
TNFSF4P23510 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TNFSF4P23510 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
TNFSF4P23510 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.86□□□□□ -0.35
TNFSF4P23510 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TNFSF4P23510 AL137783.1-201ENST00000623494 1896 ntBASIC12.86□□□□□ -0.35
TNFSF4P23510 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
TNFSF4P23510 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.86□□□□□ -0.35
TNFSF4P23510 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.86□□□□□ -0.35
TNFSF4P23510 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
TNFSF4P23510 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
TNFSF4P23510 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TNFSF4P23510 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.85□□□□□ -0.35
TNFSF4P23510 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
TNFSF4P23510 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TNFSF4P23510 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.85□□□□□ -0.35
TNFSF4P23510 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
TNFSF4P23510 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.85□□□□□ -0.35
TNFSF4P23510 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TNFSF4P23510 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.85□□□□□ -0.35
TNFSF4P23510 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.85□□□□□ -0.35
TNFSF4P23510 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TNFSF4P23510 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.85□□□□□ -0.35
TNFSF4P23510 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TNFSF4P23510 ATP5G2P4-201ENST00000442175 420 ntBASIC12.85□□□□□ -0.35
TNFSF4P23510 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.85□□□□□ -0.35
TNFSF4P23510 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.85□□□□□ -0.35
TNFSF4P23510 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms