Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.23□□□□□ -0.13
CCNA2P20248 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCNA2P20248 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCNA2P20248 WASH3P-207ENST00000560956 1394 ntBASIC14.23□□□□□ -0.13
CCNA2P20248 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.23□□□□□ -0.13
CCNA2P20248 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCNA2P20248 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.23□□□□□ -0.13
CCNA2P20248 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.23□□□□□ -0.13
CCNA2P20248 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.23□□□□□ -0.13
CCNA2P20248 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.23□□□□□ -0.13
CCNA2P20248 SDHAP3-202ENST00000515467 728 ntBASIC14.23□□□□□ -0.13
CCNA2P20248 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CCNA2P20248 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.23□□□□□ -0.13
CCNA2P20248 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.23□□□□□ -0.13
CCNA2P20248 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.23□□□□□ -0.13
CCNA2P20248 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.23□□□□□ -0.13
CCNA2P20248 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.23□□□□□ -0.13
CCNA2P20248 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.23□□□□□ -0.13
CCNA2P20248 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.23□□□□□ -0.13
CCNA2P20248 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.23□□□□□ -0.13
CCNA2P20248 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.23□□□□□ -0.13
CCNA2P20248 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.23□□□□□ -0.13
CCNA2P20248 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CCNA2P20248 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCNA2P20248 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCNA2P20248 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.22□□□□□ -0.13
CCNA2P20248 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.22□□□□□ -0.13
CCNA2P20248 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.22□□□□□ -0.13
CCNA2P20248 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.22□□□□□ -0.13
CCNA2P20248 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.22□□□□□ -0.13
CCNA2P20248 ACE3P-201ENST00000423435 1973 ntBASIC14.22□□□□□ -0.13
CCNA2P20248 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.22□□□□□ -0.13
CCNA2P20248 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.22□□□□□ -0.13
CCNA2P20248 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.22□□□□□ -0.13
CCNA2P20248 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCNA2P20248 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CCNA2P20248 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.22□□□□□ -0.13
CCNA2P20248 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CCNA2P20248 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCNA2P20248 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.22□□□□□ -0.13
CCNA2P20248 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.22□□□□□ -0.13
CCNA2P20248 SLED1-202ENST00000512051 380 ntBASIC14.22□□□□□ -0.13
CCNA2P20248 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.22□□□□□ -0.13
CCNA2P20248 RFPL4AP1-201ENST00000530883 850 ntBASIC14.22□□□□□ -0.13
CCNA2P20248 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.22□□□□□ -0.13
CCNA2P20248 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.22□□□□□ -0.13
CCNA2P20248 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.22□□□□□ -0.13
CCNA2P20248 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.22□□□□□ -0.13
CCNA2P20248 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.22□□□□□ -0.13
CCNA2P20248 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.22□□□□□ -0.13
CCNA2P20248 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.22□□□□□ -0.13
CCNA2P20248 AL390955.2-201ENST00000603032 514 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms