Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 SOCS2P1-201ENST00000417727 557 ntBASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 AC022447.6-201ENST00000515522 438 ntBASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 AC092552.1-201ENST00000547243 906 ntBASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 AC124283.3-201ENST00000570869 594 ntBASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HNRNPCL4P0DMR1 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HNRNPCL4P0DMR1 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.96□□□□□ -0.18
HNRNPCL4P0DMR1 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HNRNPCL4P0DMR1 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
HNRNPCL4P0DMR1 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HNRNPCL4P0DMR1 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HNRNPCL4P0DMR1 AL391825.1-201ENST00000457671 1364 ntBASIC13.96□□□□□ -0.18
HNRNPCL4P0DMR1 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
HNRNPCL4P0DMR1 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 DFFBP1-201ENST00000433250 979 ntBASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 INGX-202ENST00000489074 768 ntBASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 GIMAP3P-201ENST00000495150 836 ntBASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 AC006538.3-201ENST00000612495 578 ntBASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 AGGF1P1-201ENST00000509500 2073 ntBASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HNRNPCL4P0DMR1 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms