Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
SIX6O95475 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.58□□□□□ -0.4
SIX6O95475 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.57□□□□□ -0.4
SIX6O95475 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.57□□□□□ -0.4
SIX6O95475 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 AC018665.1-201ENST00000622927 1362 ntBASIC12.57□□□□□ -0.4
SIX6O95475 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SIX6O95475 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
SIX6O95475 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.57□□□□□ -0.4
SIX6O95475 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.57□□□□□ -0.4
SIX6O95475 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
SIX6O95475 AGAP10P-201ENST00000454844 2418 ntBASIC12.57□□□□□ -0.4
SIX6O95475 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SIX6O95475 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.57□□□□□ -0.4
SIX6O95475 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.57□□□□□ -0.4
SIX6O95475 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.57□□□□□ -0.4
SIX6O95475 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC12.57□□□□□ -0.4
SIX6O95475 AC140658.5-201ENST00000438532 169 ntBASIC12.57□□□□□ -0.4
SIX6O95475 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.57□□□□□ -0.4
SIX6O95475 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.57□□□□□ -0.4
SIX6O95475 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.57□□□□□ -0.4
SIX6O95475 AC105339.3-201ENST00000560043 636 ntBASIC12.57□□□□□ -0.4
SIX6O95475 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.57□□□□□ -0.4
SIX6O95475 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 RN7SL850P-201ENST00000579959 291 ntBASIC12.57□□□□□ -0.4
SIX6O95475 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.57□□□□□ -0.4
SIX6O95475 AC008735.5-201ENST00000623544 497 ntBASIC12.57□□□□□ -0.4
SIX6O95475 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.57□□□□□ -0.4
SIX6O95475 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SIX6O95475 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SIX6O95475 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.57□□□□□ -0.4
SIX6O95475 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.57□□□□□ -0.4
SIX6O95475 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.57□□□□□ -0.4
SIX6O95475 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SIX6O95475 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.57□□□□□ -0.4
SIX6O95475 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SIX6O95475 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SIX6O95475 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SIX6O95475 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SIX6O95475 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SIX6O95475 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.56□□□□□ -0.4
SIX6O95475 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SIX6O95475 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 IGLL3P-201ENST00000412472 434 ntBASIC12.56□□□□□ -0.4
SIX6O95475 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.56□□□□□ -0.4
SIX6O95475 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.56□□□□□ -0.4
SIX6O95475 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.56□□□□□ -0.4
SIX6O95475 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
SIX6O95475 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.56□□□□□ -0.4
SIX6O95475 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.56□□□□□ -0.4
SIX6O95475 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.56□□□□□ -0.4
SIX6O95475 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.56□□□□□ -0.4
SIX6O95475 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC12.56□□□□□ -0.4
SIX6O95475 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.56□□□□□ -0.4
SIX6O95475 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.56□□□□□ -0.4
SIX6O95475 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.56□□□□□ -0.4
SIX6O95475 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.56□□□□□ -0.4
SIX6O95475 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
SIX6O95475 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.56□□□□□ -0.4
SIX6O95475 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SIX6O95475 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.56□□□□□ -0.4
SIX6O95475 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 AC131902.2-201ENST00000566892 2172 ntBASIC12.56□□□□□ -0.4
SIX6O95475 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms