Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 MIR6074-201ENST00000612054 107 ntBASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV5-4A0A0C4DH59 SHC1P1-201ENST00000425230 1745 ntBASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 AL023775.1-201ENST00000454907 1746 ntBASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 KRT8P28-201ENST00000433288 1390 ntBASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 MIR658-201ENST00000385210 100 ntBASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 INTS4P1-203ENST00000641008 3683 ntBASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV5-4A0A0C4DH59 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
TRBV5-4A0A0C4DH59 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRBV5-4A0A0C4DH59 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV5-4A0A0C4DH59 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV5-4A0A0C4DH59 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
TRBV5-4A0A0C4DH59 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRBV5-4A0A0C4DH59 AC215219.1-201ENST00000400706 1817 ntBASIC14.62□□□□□ -0.07
TRBV5-4A0A0C4DH59 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.62□□□□□ -0.07
TRBV5-4A0A0C4DH59 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV5-4A0A0C4DH59 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRBV5-4A0A0C4DH59 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRBV5-4A0A0C4DH59 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRBV5-4A0A0C4DH59 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV5-4A0A0C4DH59 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV5-4A0A0C4DH59 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV5-4A0A0C4DH59 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV5-4A0A0C4DH59 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms