Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.79■□□□□ 0.44
HPS5Q9UPZ3 AF254983.2-201ENST00000612331 135 ntBASIC17.79■□□□□ 0.44
HPS5Q9UPZ3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS5Q9UPZ3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.79■□□□□ 0.44
HPS5Q9UPZ3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS5Q9UPZ3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.79■□□□□ 0.44
HPS5Q9UPZ3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS5Q9UPZ3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.79■□□□□ 0.44
HPS5Q9UPZ3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.79■□□□□ 0.44
HPS5Q9UPZ3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.79■□□□□ 0.44
HPS5Q9UPZ3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 KLF2P2-201ENST00000416807 1039 ntBASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 AC012618.1-201ENST00000461223 412 ntBASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 RN7SL8P-201ENST00000461771 266 ntBASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 RN7SL181P-201ENST00000462921 277 ntBASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 AC022217.1-201ENST00000521069 738 ntBASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 DUX4L47-201ENST00000566374 394 ntBASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 AL645939.5-201ENST00000606834 243 ntBASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 AP005019.2-201ENST00000615104 511 ntBASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 CYP51A1P3-201ENST00000400072 1428 ntBASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 KRT8P14-201ENST00000414254 1442 ntBASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.78■□□□□ 0.44
HPS5Q9UPZ3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 AC023090.2-201ENST00000625182 2110 ntBASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 ACTG1P2-201ENST00000415776 1125 ntBASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 ACTG1P11-201ENST00000425411 1125 ntBASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 EIF3FP3-201ENST00000434851 1086 ntBASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HPS5Q9UPZ3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.77■□□□□ 0.43
HPS5Q9UPZ3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HPS5Q9UPZ3 AC018529.2-202ENST00000611482 3087 ntBASIC17.77■□□□□ 0.43
HPS5Q9UPZ3 AL354989.2-201ENST00000435838 1540 ntBASIC17.77■□□□□ 0.43
HPS5Q9UPZ3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
HPS5Q9UPZ3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HPS5Q9UPZ3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.77■□□□□ 0.43
HPS5Q9UPZ3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HPS5Q9UPZ3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HPS5Q9UPZ3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
HPS5Q9UPZ3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HPS5Q9UPZ3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HPS5Q9UPZ3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.76■□□□□ 0.43
HPS5Q9UPZ3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms