Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 AC005730.2-201ENST00000564549 1184 ntBASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 AL022328.3-201ENST00000607943 679 ntBASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 AL354877.1-201ENST00000424412 413 ntBASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 HNRNPA1P63-201ENST00000427917 963 ntBASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 POM121L10P-201ENST00000436994 1285 ntBASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 AC007292.2-201ENST00000593524 1812 ntBASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20BQ9P0W2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 CICP14-201ENST00000629111 2732 ntBASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20BQ9P0W2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms