Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CRAMP1Q96RY5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.01■□□□□ 0.47
CRAMP1Q96RY5 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18■□□□□ 0.47
CRAMP1Q96RY5 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC18■□□□□ 0.47
CRAMP1Q96RY5 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18■□□□□ 0.47
CRAMP1Q96RY5 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 KRT17P5-201ENST00000332088 839 ntBASIC18■□□□□ 0.47
CRAMP1Q96RY5 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC18■□□□□ 0.47
CRAMP1Q96RY5 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC18■□□□□ 0.47
CRAMP1Q96RY5 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC18■□□□□ 0.47
CRAMP1Q96RY5 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC18■□□□□ 0.47
CRAMP1Q96RY5 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC18■□□□□ 0.47
CRAMP1Q96RY5 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC18■□□□□ 0.47
CRAMP1Q96RY5 NUDT4P2-201ENST00000578341 546 ntBASIC18■□□□□ 0.47
CRAMP1Q96RY5 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CRAMP1Q96RY5 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CRAMP1Q96RY5 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CRAMP1Q96RY5 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18■□□□□ 0.47
CRAMP1Q96RY5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CRAMP1Q96RY5 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 LINC01815-202ENST00000641468 1409 ntBASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 SSR4P1-203ENST00000599569 2260 ntBASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 AC092638.2-201ENST00000441105 947 ntBASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 AL354861.1-201ENST00000445213 355 ntBASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 PTK2-225ENST00000520892 571 ntTSL 4 BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 AC127024.7-201ENST00000625101 200 ntBASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 AC090502.4-201ENST00000551714 1386 ntBASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRAMP1Q96RY5 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 AC136621.1-201ENST00000624017 2304 ntBASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 KRT8P1-201ENST00000557533 1207 ntBASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 MIR3180-2-201ENST00000581748 88 ntBASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms