Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.99■□□□□ 0.15
CTC1Q2NKJ3 AC242376.1-201ENST00000559033 726 ntBASIC15.99■□□□□ 0.15
CTC1Q2NKJ3 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CTC1Q2NKJ3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.99■□□□□ 0.15
CTC1Q2NKJ3 AC006213.4-201ENST00000616184 634 ntBASIC15.99■□□□□ 0.15
CTC1Q2NKJ3 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.99■□□□□ 0.15
CTC1Q2NKJ3 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC15.99■□□□□ 0.15
CTC1Q2NKJ3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.99■□□□□ 0.15
CTC1Q2NKJ3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CTC1Q2NKJ3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CTC1Q2NKJ3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.99■□□□□ 0.15
CTC1Q2NKJ3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CTC1Q2NKJ3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CTC1Q2NKJ3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CTC1Q2NKJ3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CTC1Q2NKJ3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CTC1Q2NKJ3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CTC1Q2NKJ3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CTC1Q2NKJ3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CTC1Q2NKJ3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 AC116345.2-201ENST00000512837 523 ntBASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 MIR4783-201ENST00000580343 82 ntBASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 AC012044.1-201ENST00000603431 297 ntBASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 AC138466.3-201ENST00000619983 221 ntBASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CTC1Q2NKJ3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 AP003680.1-201ENST00000598970 3660 ntBASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 CICP4-201ENST00000447359 2812 ntBASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms