Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.09□□□□□ -0.31
ATP1B3P54709 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ATP1B3P54709 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ATP1B3P54709 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
ATP1B3P54709 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
ATP1B3P54709 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ATP1B3P54709 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.09□□□□□ -0.31
ATP1B3P54709 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.09□□□□□ -0.31
ATP1B3P54709 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.09□□□□□ -0.31
ATP1B3P54709 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.09□□□□□ -0.31
ATP1B3P54709 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.09□□□□□ -0.31
ATP1B3P54709 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ATP1B3P54709 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.31
ATP1B3P54709 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.08□□□□□ -0.31
ATP1B3P54709 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.08□□□□□ -0.31
ATP1B3P54709 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
ATP1B3P54709 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
ATP1B3P54709 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ATP1B3P54709 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
ATP1B3P54709 AC087386.2-201ENST00000623212 4637 ntBASIC13.08□□□□□ -0.31
ATP1B3P54709 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ATP1B3P54709 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ATP1B3P54709 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ATP1B3P54709 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.08□□□□□ -0.32
ATP1B3P54709 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.08□□□□□ -0.32
ATP1B3P54709 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.08□□□□□ -0.32
ATP1B3P54709 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.08□□□□□ -0.32
ATP1B3P54709 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.08□□□□□ -0.32
ATP1B3P54709 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.08□□□□□ -0.32
ATP1B3P54709 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.08□□□□□ -0.32
ATP1B3P54709 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.08□□□□□ -0.32
ATP1B3P54709 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.08□□□□□ -0.32
ATP1B3P54709 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.08□□□□□ -0.32
ATP1B3P54709 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ATP1B3P54709 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
ATP1B3P54709 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.08□□□□□ -0.32
ATP1B3P54709 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.08□□□□□ -0.32
ATP1B3P54709 AL158212.4-201ENST00000624062 1286 ntBASIC13.08□□□□□ -0.32
ATP1B3P54709 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ATP1B3P54709 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.08□□□□□ -0.32
ATP1B3P54709 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.08□□□□□ -0.32
ATP1B3P54709 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
ATP1B3P54709 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 PEG13-201ENST00000631594 5667 ntBASIC13.08□□□□□ -0.32
ATP1B3P54709 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.08□□□□□ -0.32
ATP1B3P54709 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.08□□□□□ -0.32
ATP1B3P54709 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.08□□□□□ -0.32
ATP1B3P54709 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ATP1B3P54709 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.08□□□□□ -0.32
ATP1B3P54709 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.07□□□□□ -0.32
ATP1B3P54709 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
ATP1B3P54709 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.07□□□□□ -0.32
ATP1B3P54709 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.07□□□□□ -0.32
ATP1B3P54709 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
ATP1B3P54709 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ATP1B3P54709 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ATP1B3P54709 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
ATP1B3P54709 AC009477.1-201ENST00000452936 217 ntBASIC13.07□□□□□ -0.32
ATP1B3P54709 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.07□□□□□ -0.32
ATP1B3P54709 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ATP1B3P54709 AC135586.1-201ENST00000539323 574 ntBASIC13.07□□□□□ -0.32
ATP1B3P54709 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.07□□□□□ -0.32
ATP1B3P54709 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms