Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN1P05114 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN1P05114 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.65□□□□□ -0.22
HMGN1P05114 AC118758.2-201ENST00000614242 2813 ntBASIC13.65□□□□□ -0.22
HMGN1P05114 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.65□□□□□ -0.22
HMGN1P05114 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN1P05114 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HMGN1P05114 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.65□□□□□ -0.22
HMGN1P05114 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.65□□□□□ -0.22
HMGN1P05114 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN1P05114 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
HMGN1P05114 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.65□□□□□ -0.22
HMGN1P05114 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN1P05114 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
HMGN1P05114 TUBB3P1-201ENST00000405796 1332 ntBASIC13.64□□□□□ -0.23
HMGN1P05114 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
HMGN1P05114 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.64□□□□□ -0.23
HMGN1P05114 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
HMGN1P05114 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HMGN1P05114 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.64□□□□□ -0.23
HMGN1P05114 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.64□□□□□ -0.23
HMGN1P05114 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.64□□□□□ -0.23
HMGN1P05114 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
HMGN1P05114 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.64□□□□□ -0.23
HMGN1P05114 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HMGN1P05114 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
HMGN1P05114 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
HMGN1P05114 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HMGN1P05114 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.64□□□□□ -0.23
HMGN1P05114 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.64□□□□□ -0.23
HMGN1P05114 GAPDHP40-201ENST00000505218 1006 ntBASIC13.64□□□□□ -0.23
HMGN1P05114 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.64□□□□□ -0.23
HMGN1P05114 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.64□□□□□ -0.23
HMGN1P05114 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.64□□□□□ -0.23
HMGN1P05114 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.64□□□□□ -0.23
HMGN1P05114 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.64□□□□□ -0.23
HMGN1P05114 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.64□□□□□ -0.23
HMGN1P05114 SPDYE12P-201ENST00000618416 771 ntBASIC13.64□□□□□ -0.23
HMGN1P05114 AC073592.8-201ENST00000624126 511 ntBASIC13.64□□□□□ -0.23
HMGN1P05114 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.64□□□□□ -0.23
HMGN1P05114 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HMGN1P05114 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.64□□□□□ -0.23
HMGN1P05114 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HMGN1P05114 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.64□□□□□ -0.23
HMGN1P05114 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.64□□□□□ -0.23
HMGN1P05114 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
HMGN1P05114 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN1P05114 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HMGN1P05114 KRT8P22-201ENST00000562317 1415 ntBASIC13.64□□□□□ -0.23
HMGN1P05114 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HMGN1P05114 AL137783.1-201ENST00000623494 1896 ntBASIC13.63□□□□□ -0.23
HMGN1P05114 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HMGN1P05114 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.63□□□□□ -0.23
HMGN1P05114 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HMGN1P05114 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 AC023090.2-201ENST00000625182 2110 ntBASIC13.63□□□□□ -0.23
HMGN1P05114 AC131212.3-201ENST00000624087 4219 ntBASIC13.63□□□□□ -0.23
HMGN1P05114 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.63□□□□□ -0.23
HMGN1P05114 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HMGN1P05114 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms