Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.11□□□□□ -0.15
HCN1O60741 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.11□□□□□ -0.15
HCN1O60741 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HCN1O60741 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HCN1O60741 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 AJ011931.1-201ENST00000618749 2492 ntBASIC14.1□□□□□ -0.15
HCN1O60741 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 AC138969.2-201ENST00000532739 9932 ntBASIC14.1□□□□□ -0.15
HCN1O60741 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.1□□□□□ -0.15
HCN1O60741 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HCN1O60741 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HCN1O60741 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.1□□□□□ -0.15
HCN1O60741 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HCN1O60741 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
HCN1O60741 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.1□□□□□ -0.15
HCN1O60741 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HCN1O60741 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.1□□□□□ -0.15
HCN1O60741 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.1□□□□□ -0.15
HCN1O60741 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.1□□□□□ -0.15
HCN1O60741 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.1□□□□□ -0.15
HCN1O60741 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.1□□□□□ -0.15
HCN1O60741 AC009486.1-201ENST00000569860 813 ntBASIC14.1□□□□□ -0.15
HCN1O60741 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.1□□□□□ -0.15
HCN1O60741 AC233724.13-201ENST00000598383 410 ntBASIC14.1□□□□□ -0.15
HCN1O60741 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
HCN1O60741 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.1□□□□□ -0.15
HCN1O60741 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.1□□□□□ -0.15
HCN1O60741 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
HCN1O60741 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
HCN1O60741 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HCN1O60741 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
HCN1O60741 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HCN1O60741 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.1□□□□□ -0.15
HCN1O60741 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.1□□□□□ -0.15
HCN1O60741 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HCN1O60741 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HCN1O60741 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HCN1O60741 CICP11-201ENST00000434745 2827 ntBASIC14.1□□□□□ -0.15
HCN1O60741 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.1□□□□□ -0.15
HCN1O60741 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HCN1O60741 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.09□□□□□ -0.15
HCN1O60741 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.09□□□□□ -0.15
HCN1O60741 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.09□□□□□ -0.15
HCN1O60741 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
HCN1O60741 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.09□□□□□ -0.15
HCN1O60741 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.09□□□□□ -0.15
HCN1O60741 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HCN1O60741 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.09□□□□□ -0.15
HCN1O60741 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms