Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.27□□□□□ -0.12
CASQ2O14958 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CASQ2O14958 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CASQ2O14958 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.27□□□□□ -0.12
CASQ2O14958 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.27□□□□□ -0.12
CASQ2O14958 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CASQ2O14958 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CASQ2O14958 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CASQ2O14958 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CASQ2O14958 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CASQ2O14958 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CASQ2O14958 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CASQ2O14958 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CASQ2O14958 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CASQ2O14958 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CASQ2O14958 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.27□□□□□ -0.13
CASQ2O14958 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.27□□□□□ -0.13
CASQ2O14958 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.27□□□□□ -0.13
CASQ2O14958 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CASQ2O14958 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.27□□□□□ -0.13
CASQ2O14958 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
CASQ2O14958 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.27□□□□□ -0.13
CASQ2O14958 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.27□□□□□ -0.13
CASQ2O14958 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.27□□□□□ -0.13
CASQ2O14958 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
CASQ2O14958 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CASQ2O14958 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CASQ2O14958 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.27□□□□□ -0.13
CASQ2O14958 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC14.27□□□□□ -0.13
CASQ2O14958 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.27□□□□□ -0.13
CASQ2O14958 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
CASQ2O14958 MAPK10-262ENST00000641051 5738 ntBASIC14.27□□□□□ -0.13
CASQ2O14958 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.27□□□□□ -0.13
CASQ2O14958 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CASQ2O14958 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CASQ2O14958 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.27□□□□□ -0.13
CASQ2O14958 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.27□□□□□ -0.13
CASQ2O14958 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CASQ2O14958 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CASQ2O14958 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.27□□□□□ -0.13
CASQ2O14958 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CASQ2O14958 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CASQ2O14958 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CASQ2O14958 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CASQ2O14958 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CASQ2O14958 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CASQ2O14958 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.26□□□□□ -0.13
CASQ2O14958 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CASQ2O14958 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
CASQ2O14958 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CASQ2O14958 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
CASQ2O14958 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.26□□□□□ -0.13
CASQ2O14958 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.26□□□□□ -0.13
CASQ2O14958 OR7E14P-202ENST00000530490 1290 ntBASIC14.26□□□□□ -0.13
CASQ2O14958 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.26□□□□□ -0.13
CASQ2O14958 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.26□□□□□ -0.13
CASQ2O14958 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.26□□□□□ -0.13
CASQ2O14958 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.26□□□□□ -0.13
CASQ2O14958 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.26□□□□□ -0.13
CASQ2O14958 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 TP73-201ENST00000346387 4854 ntTSL 5 BASIC14.26□□□□□ -0.13
CASQ2O14958 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.26□□□□□ -0.13
CASQ2O14958 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CASQ2O14958 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.26□□□□□ -0.13
CASQ2O14958 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 AL023775.1-201ENST00000454907 1746 ntBASIC14.26□□□□□ -0.13
CASQ2O14958 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.26□□□□□ -0.13
CASQ2O14958 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CASQ2O14958 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CASQ2O14958 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.25□□□□□ -0.13
CASQ2O14958 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CASQ2O14958 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CASQ2O14958 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CASQ2O14958 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CASQ2O14958 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CASQ2O14958 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CASQ2O14958 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CASQ2O14958 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.25□□□□□ -0.13
CASQ2O14958 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CASQ2O14958 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CASQ2O14958 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CASQ2O14958 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms