Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AL139339.2-201ENST00000608063 657 ntBASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTCH2Q9Y6C5 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 AC092127.1-201ENST00000567093 3455 ntBASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 AL365203.3-201ENST00000609742 2057 ntBASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 AC007952.4-201ENST00000573866 637 ntBASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTCH2Q9Y6C5 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PTCH2Q9Y6C5 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PTCH2Q9Y6C5 REXO1L4P-201ENST00000605109 1937 ntBASIC16.64■□□□□ 0.26
PTCH2Q9Y6C5 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PTCH2Q9Y6C5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 PCDHA1-201ENST00000378133 2726 ntBASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 CICP11-201ENST00000434745 2827 ntBASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCH2Q9Y6C5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
PTCH2Q9Y6C5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTCH2Q9Y6C5 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms