Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
HMG20BQ9P0W2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.2■□□□□ 0.5
HMG20BQ9P0W2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.2■□□□□ 0.5
HMG20BQ9P0W2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 MIR4783-201ENST00000580343 82 ntBASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 AC002472.3-201ENST00000640124 621 ntBASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
HMG20BQ9P0W2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 GPAA1P2-201ENST00000417923 928 ntBASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 MIR3615-201ENST00000581999 87 ntBASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 LINC02228-204ENST00000642115 2962 ntBASIC18.18■□□□□ 0.5
HMG20BQ9P0W2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.17■□□□□ 0.5
HMG20BQ9P0W2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms