Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 AC090502.4-201ENST00000551714 1386 ntBASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 MIR3180-2-201ENST00000581748 88 ntBASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 AC005357.2-202ENST00000590507 1060 ntBASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNKSR3Q6P9H4 KRT8P28-201ENST00000433288 1390 ntBASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 AL590440.2-201ENST00000641973 1595 ntBASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 AC023024.2-201ENST00000623561 1993 ntBASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 HLA-DMA-203ENST00000395305 777 ntBASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 AL354861.1-201ENST00000445213 355 ntBASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 RN7SL470P-201ENST00000583069 259 ntBASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 AC126365.1-201ENST00000578585 1514 ntBASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.87■□□□□ 0.13
CNKSR3Q6P9H4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.86■□□□□ 0.13
CNKSR3Q6P9H4 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms