Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 AC089987.1-201ENST00000551654 2209 ntBASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 RN7SL618P-201ENST00000477850 296 ntBASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 MIR3687-2-201ENST00000577708 61 ntBASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 MIR3687-1-201ENST00000614492 61 ntBASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 AP001059.3-201ENST00000619053 235 ntBASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 AC152010.1-201ENST00000415779 2006 ntBASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 AL356585.2-201ENST00000625078 2396 ntBASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 AC011474.4-201ENST00000623523 2076 ntBASIC13.67□□□□□ -0.22
LCN1P1Q5VSP4 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 AC027612.1-201ENST00000445234 2395 ntBASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 AC099521.3-201ENST00000624251 2938 ntBASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 AF228730.6-201ENST00000641497 218 ntBASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 AC084121.3-201ENST00000641716 218 ntBASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms