Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 AC130686.1-201ENST00000622936 2466 ntBASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 ALG1L5P-201ENST00000482043 771 ntBASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 AC093520.2-201ENST00000561830 333 ntBASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 MIR6080-201ENST00000617359 66 ntBASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 AL513210.1-201ENST00000629608 234 ntBASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 MAPT-IT1-201ENST00000624111 3016 ntBASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 AC004461.1-201ENST00000412461 403 ntBASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC10.29□□□□□ -0.76
LINC00242Q5T6M2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms