Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRBV12-3P01733 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRBV12-3P01733 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRBV12-3P01733 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRBV12-3P01733 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRBV12-3P01733 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 WBP2-203ENST00000433525 928 ntTSL 2 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 GPR53P-205ENST00000457298 1084 ntBASIC11.62□□□□□ -0.55
TRBV12-3P01733 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 AC078819.1-201ENST00000547454 765 ntBASIC11.62□□□□□ -0.55
TRBV12-3P01733 AC012085.1-201ENST00000548270 765 ntBASIC11.62□□□□□ -0.55
TRBV12-3P01733 AC106886.1-201ENST00000568660 600 ntBASIC11.62□□□□□ -0.55
TRBV12-3P01733 RN7SL48P-201ENST00000579283 293 ntBASIC11.62□□□□□ -0.55
TRBV12-3P01733 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 AC138951.2-201ENST00000623455 1161 ntBASIC11.62□□□□□ -0.55
TRBV12-3P01733 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRBV12-3P01733 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRBV12-3P01733 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRBV12-3P01733 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRBV12-3P01733 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRBV12-3P01733 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRBV12-3P01733 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRBV12-3P01733 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRBV12-3P01733 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRBV12-3P01733 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRBV12-3P01733 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRBV12-3P01733 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRBV12-3P01733 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRBV12-3P01733 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC11.62□□□□□ -0.55
TRBV12-3P01733 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 AC018442.1-201ENST00000421439 2061 ntBASIC11.61□□□□□ -0.55
TRBV12-3P01733 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 TPM3P8-201ENST00000330554 643 ntBASIC11.61□□□□□ -0.55
TRBV12-3P01733 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 MIR1909-201ENST00000411312 80 ntBASIC11.61□□□□□ -0.55
TRBV12-3P01733 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 CTBP2P5-201ENST00000454986 1264 ntBASIC11.61□□□□□ -0.55
TRBV12-3P01733 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 RPS24-214ENST00000613865 538 ntTSL 5 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms