Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NDUFS3O75489 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.02□□□□□ -0.01
NDUFS3O75489 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.01□□□□□ -0.01
NDUFS3O75489 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.01□□□□□ -0.01
NDUFS3O75489 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.01□□□□□ -0.01
NDUFS3O75489 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NDUFS3O75489 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NDUFS3O75489 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.01□□□□□ -0.01
NDUFS3O75489 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.01□□□□□ -0.01
NDUFS3O75489 CRB3P1-201ENST00000449338 276 ntBASIC15.01□□□□□ -0.01
NDUFS3O75489 AC093433.1-201ENST00000458048 571 ntBASIC15.01□□□□□ -0.01
NDUFS3O75489 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.01□□□□□ -0.01
NDUFS3O75489 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.01□□□□□ -0.01
NDUFS3O75489 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.01□□□□□ -0.01
NDUFS3O75489 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.01□□□□□ -0.01
NDUFS3O75489 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.01□□□□□ -0.01
NDUFS3O75489 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.01□□□□□ -0.01
NDUFS3O75489 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.01□□□□□ -0.01
NDUFS3O75489 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.01□□□□□ -0.01
NDUFS3O75489 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.01□□□□□ -0.01
NDUFS3O75489 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NDUFS3O75489 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.01□□□□□ -0.01
NDUFS3O75489 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
NDUFS3O75489 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.01□□□□□ -0.01
NDUFS3O75489 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.01□□□□□ -0.01
NDUFS3O75489 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFS3O75489 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NDUFS3O75489 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
NDUFS3O75489 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15□□□□□ -0.01
NDUFS3O75489 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15□□□□□ -0.01
NDUFS3O75489 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 AC140479.7-201ENST00000636301 2332 ntBASIC15□□□□□ -0.01
NDUFS3O75489 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15□□□□□ -0.01
NDUFS3O75489 KRT8P35-201ENST00000483942 1338 ntBASIC15□□□□□ -0.01
NDUFS3O75489 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
NDUFS3O75489 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
NDUFS3O75489 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15□□□□□ -0.01
NDUFS3O75489 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NDUFS3O75489 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NDUFS3O75489 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15□□□□□ -0.01
NDUFS3O75489 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15□□□□□ -0.01
NDUFS3O75489 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15□□□□□ -0.01
NDUFS3O75489 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15□□□□□ -0.01
NDUFS3O75489 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
NDUFS3O75489 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15□□□□□ -0.01
NDUFS3O75489 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NDUFS3O75489 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15□□□□□ -0.01
NDUFS3O75489 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
NDUFS3O75489 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15□□□□□ -0.01
NDUFS3O75489 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15□□□□□ -0.01
NDUFS3O75489 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 AL009178.2-201ENST00000597278 2719 ntBASIC15□□□□□ -0.01
NDUFS3O75489 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15□□□□□ -0.01
NDUFS3O75489 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NDUFS3O75489 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
NDUFS3O75489 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms