Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RIPK2O43353 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.03
RIPK2O43353 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RIPK2O43353 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RIPK2O43353 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
RIPK2O43353 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
RIPK2O43353 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RIPK2O43353 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.27■□□□□ 0.03
RIPK2O43353 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
RIPK2O43353 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RIPK2O43353 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.27■□□□□ 0.03
RIPK2O43353 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RIPK2O43353 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
RIPK2O43353 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
RIPK2O43353 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.03
RIPK2O43353 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RIPK2O43353 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RIPK2O43353 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.26■□□□□ 0.03
RIPK2O43353 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RIPK2O43353 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.26■□□□□ 0.03
RIPK2O43353 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.26■□□□□ 0.03
RIPK2O43353 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RIPK2O43353 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.26■□□□□ 0.03
RIPK2O43353 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.26■□□□□ 0.03
RIPK2O43353 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.26■□□□□ 0.03
RIPK2O43353 AC005829.1-201ENST00000570002 483 ntBASIC15.26■□□□□ 0.03
RIPK2O43353 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 TEX28P1-201ENST00000613479 1221 ntBASIC15.26■□□□□ 0.03
RIPK2O43353 TEX28P2-201ENST00000617764 1221 ntBASIC15.26■□□□□ 0.03
RIPK2O43353 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RIPK2O43353 AP001059.3-201ENST00000619053 235 ntBASIC15.26■□□□□ 0.03
RIPK2O43353 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.26■□□□□ 0.03
RIPK2O43353 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RIPK2O43353 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.26■□□□□ 0.03
RIPK2O43353 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.26■□□□□ 0.03
RIPK2O43353 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.26■□□□□ 0.03
RIPK2O43353 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RIPK2O43353 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.26■□□□□ 0.03
RIPK2O43353 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RIPK2O43353 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
RIPK2O43353 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.26■□□□□ 0.03
RIPK2O43353 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.26■□□□□ 0.03
RIPK2O43353 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.25■□□□□ 0.03
RIPK2O43353 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
RIPK2O43353 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RIPK2O43353 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.25■□□□□ 0.03
RIPK2O43353 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.25■□□□□ 0.03
RIPK2O43353 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.25■□□□□ 0.03
RIPK2O43353 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 MYADML-201ENST00000474610 2147 ntBASIC15.25■□□□□ 0.03
RIPK2O43353 TUBB3P1-201ENST00000405796 1332 ntBASIC15.25■□□□□ 0.03
RIPK2O43353 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.25■□□□□ 0.03
RIPK2O43353 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RIPK2O43353 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RIPK2O43353 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.25■□□□□ 0.03
RIPK2O43353 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.25■□□□□ 0.03
RIPK2O43353 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.25■□□□□ 0.03
RIPK2O43353 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.25■□□□□ 0.03
RIPK2O43353 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.25■□□□□ 0.03
RIPK2O43353 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 RN7SL618P-201ENST00000477850 296 ntBASIC15.25■□□□□ 0.03
RIPK2O43353 SDHAP3-202ENST00000515467 728 ntBASIC15.25■□□□□ 0.03
RIPK2O43353 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.25■□□□□ 0.03
RIPK2O43353 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.25■□□□□ 0.03
RIPK2O43353 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
RIPK2O43353 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.25■□□□□ 0.03
RIPK2O43353 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms