Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS33AQ96AX1 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS33AQ96AX1 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS33AQ96AX1 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS33AQ96AX1 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VPS33AQ96AX1 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS33AQ96AX1 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS33AQ96AX1 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 AC055811.4-201ENST00000624039 1754 ntBASIC14.5□□□□□ -0.09
VPS33AQ96AX1 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 AC069262.1-201ENST00000539058 672 ntBASIC14.5□□□□□ -0.09
VPS33AQ96AX1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 AC000095.1-201ENST00000603208 874 ntBASIC14.5□□□□□ -0.09
VPS33AQ96AX1 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS33AQ96AX1 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 AC018665.1-201ENST00000622927 1362 ntBASIC14.49□□□□□ -0.09
VPS33AQ96AX1 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 AL354702.1-201ENST00000442006 1960 ntBASIC14.49□□□□□ -0.09
VPS33AQ96AX1 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 AC211486.1-202ENST00000416371 468 ntBASIC14.49□□□□□ -0.09
VPS33AQ96AX1 UPF3AP3-201ENST00000420996 769 ntBASIC14.49□□□□□ -0.09
VPS33AQ96AX1 BX842568.4-201ENST00000421222 227 ntBASIC14.49□□□□□ -0.09
VPS33AQ96AX1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 AC211476.1-201ENST00000503899 468 ntBASIC14.49□□□□□ -0.09
VPS33AQ96AX1 SDHAP3-202ENST00000515467 728 ntBASIC14.49□□□□□ -0.09
VPS33AQ96AX1 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms