Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.93□□□□□ -0.18
HPS1Q92902 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.93□□□□□ -0.18
HPS1Q92902 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.93□□□□□ -0.18
HPS1Q92902 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.93□□□□□ -0.18
HPS1Q92902 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HPS1Q92902 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HPS1Q92902 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HPS1Q92902 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HPS1Q92902 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HPS1Q92902 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HPS1Q92902 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.92□□□□□ -0.18
HPS1Q92902 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HPS1Q92902 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.92□□□□□ -0.18
HPS1Q92902 COX20P2-201ENST00000452636 358 ntBASIC13.92□□□□□ -0.18
HPS1Q92902 AC125807.1-201ENST00000483097 614 ntBASIC13.92□□□□□ -0.18
HPS1Q92902 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.92□□□□□ -0.18
HPS1Q92902 AC093214.1-201ENST00000511688 1107 ntBASIC13.92□□□□□ -0.18
HPS1Q92902 PRYP6-201ENST00000514804 343 ntBASIC13.92□□□□□ -0.18
HPS1Q92902 AC105233.2-201ENST00000523697 349 ntBASIC13.92□□□□□ -0.18
HPS1Q92902 AF228730.5-201ENST00000530288 346 ntBASIC13.92□□□□□ -0.18
HPS1Q92902 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC13.92□□□□□ -0.18
HPS1Q92902 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.92□□□□□ -0.18
HPS1Q92902 DUX4L27-201ENST00000554796 1261 ntBASIC13.92□□□□□ -0.18
HPS1Q92902 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.92□□□□□ -0.18
HPS1Q92902 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
HPS1Q92902 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.92□□□□□ -0.18
HPS1Q92902 MIR4745-201ENST00000577608 62 ntBASIC13.92□□□□□ -0.18
HPS1Q92902 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.92□□□□□ -0.18
HPS1Q92902 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.92□□□□□ -0.18
HPS1Q92902 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
HPS1Q92902 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.92□□□□□ -0.18
HPS1Q92902 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
HPS1Q92902 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.92□□□□□ -0.18
HPS1Q92902 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.92□□□□□ -0.18
HPS1Q92902 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.92□□□□□ -0.18
HPS1Q92902 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.92□□□□□ -0.18
HPS1Q92902 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 MST1P2-201ENST00000457982 2291 ntBASIC13.92□□□□□ -0.18
HPS1Q92902 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.92□□□□□ -0.18
HPS1Q92902 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HPS1Q92902 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.91□□□□□ -0.18
HPS1Q92902 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.91□□□□□ -0.18
HPS1Q92902 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.91□□□□□ -0.18
HPS1Q92902 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.91□□□□□ -0.18
HPS1Q92902 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
HPS1Q92902 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.91□□□□□ -0.18
HPS1Q92902 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HPS1Q92902 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
HPS1Q92902 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms