Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 MIR4525-201ENST00000580000 75 ntBASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 AC026790.2-201ENST00000606282 430 ntBASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 AL133338.1-201ENST00000565695 1517 ntBASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 INE2-201ENST00000630399 1874 ntBASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 MTHFR-210ENST00000641407 2387 ntBASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 AC078819.1-201ENST00000547454 765 ntBASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 AC012085.1-201ENST00000548270 765 ntBASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 KRT90P-201ENST00000549264 1064 ntBASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 RN7SL121P-201ENST00000584223 273 ntBASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCUBE3Q8IX30 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms