Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
EPHA4P54764 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EPHA4P54764 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
EPHA4P54764 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
EPHA4P54764 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
EPHA4P54764 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 AC136621.1-201ENST00000624017 2304 ntBASIC14.44□□□□□ -0.1
EPHA4P54764 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.44□□□□□ -0.1
EPHA4P54764 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.44□□□□□ -0.1
EPHA4P54764 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.44□□□□□ -0.1
EPHA4P54764 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.44□□□□□ -0.1
EPHA4P54764 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.44□□□□□ -0.1
EPHA4P54764 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.44□□□□□ -0.1
EPHA4P54764 AC010141.1-201ENST00000411585 623 ntBASIC14.44□□□□□ -0.1
EPHA4P54764 FAM58BP-201ENST00000439056 645 ntBASIC14.44□□□□□ -0.1
EPHA4P54764 TUBB8P8-201ENST00000458717 1058 ntBASIC14.44□□□□□ -0.1
EPHA4P54764 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.44□□□□□ -0.1
EPHA4P54764 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.44□□□□□ -0.1
EPHA4P54764 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.44□□□□□ -0.1
EPHA4P54764 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.44□□□□□ -0.1
EPHA4P54764 AL359258.3-201ENST00000622910 2331 ntBASIC14.44□□□□□ -0.1
EPHA4P54764 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
EPHA4P54764 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
EPHA4P54764 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
EPHA4P54764 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EPHA4P54764 SHC1P1-201ENST00000425230 1745 ntBASIC14.44□□□□□ -0.1
EPHA4P54764 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
EPHA4P54764 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
EPHA4P54764 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 AC063926.3-201ENST00000624734 5658 ntBASIC14.43□□□□□ -0.1
EPHA4P54764 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
EPHA4P54764 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.43□□□□□ -0.1
EPHA4P54764 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.43□□□□□ -0.1
EPHA4P54764 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
EPHA4P54764 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
EPHA4P54764 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
EPHA4P54764 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.43□□□□□ -0.1
EPHA4P54764 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
EPHA4P54764 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
EPHA4P54764 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.43□□□□□ -0.1
EPHA4P54764 HNRNPA1P23-201ENST00000491091 1133 ntBASIC14.43□□□□□ -0.1
EPHA4P54764 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.43□□□□□ -0.1
EPHA4P54764 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.43□□□□□ -0.1
EPHA4P54764 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC14.43□□□□□ -0.1
EPHA4P54764 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.43□□□□□ -0.1
EPHA4P54764 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.43□□□□□ -0.1
EPHA4P54764 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.43□□□□□ -0.1
EPHA4P54764 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 AC003102.2-201ENST00000589195 1469 ntBASIC14.43□□□□□ -0.1
EPHA4P54764 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.43□□□□□ -0.1
EPHA4P54764 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EPHA4P54764 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms