Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC11.49□□□□□ -0.57
TCRAP04437 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
TCRAP04437 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
TCRAP04437 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 KRT8P24-201ENST00000560290 1559 ntBASIC11.49□□□□□ -0.57
TCRAP04437 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
TCRAP04437 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
TCRAP04437 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
TCRAP04437 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
TCRAP04437 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
TCRAP04437 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
TCRAP04437 INE2-201ENST00000630399 1874 ntBASIC11.49□□□□□ -0.57
TCRAP04437 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
TCRAP04437 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
TCRAP04437 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
TCRAP04437 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
TCRAP04437 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.48□□□□□ -0.57
TCRAP04437 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
TCRAP04437 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC11.48□□□□□ -0.57
TCRAP04437 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC11.48□□□□□ -0.57
TCRAP04437 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.48□□□□□ -0.57
TCRAP04437 MKNK2P1-201ENST00000437526 628 ntBASIC11.48□□□□□ -0.57
TCRAP04437 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC11.48□□□□□ -0.57
TCRAP04437 AC004066.1-201ENST00000502488 802 ntBASIC11.48□□□□□ -0.57
TCRAP04437 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TCRAP04437 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.48□□□□□ -0.57
TCRAP04437 PIN1-206ENST00000587625 878 ntTSL 2 BASIC11.48□□□□□ -0.57
TCRAP04437 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11.48□□□□□ -0.57
TCRAP04437 INO80C-210ENST00000590757 595 ntTSL 2 BASIC11.48□□□□□ -0.57
TCRAP04437 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 C20orf181-201ENST00000623918 480 ntBASIC11.48□□□□□ -0.57
TCRAP04437 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.48□□□□□ -0.57
TCRAP04437 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.48□□□□□ -0.57
TCRAP04437 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11.48□□□□□ -0.57
TCRAP04437 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC11.48□□□□□ -0.57
TCRAP04437 AC090505.1-201ENST00000430515 1834 ntBASIC11.48□□□□□ -0.57
TCRAP04437 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.48□□□□□ -0.57
TCRAP04437 AL157414.3-201ENST00000624276 1954 ntBASIC11.48□□□□□ -0.57
TCRAP04437 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TCRAP04437 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 AL359183.1-201ENST00000623796 2132 ntBASIC11.48□□□□□ -0.57
TCRAP04437 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TCRAP04437 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.48□□□□□ -0.57
TCRAP04437 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC11.48□□□□□ -0.57
TCRAP04437 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC11.48□□□□□ -0.57
TCRAP04437 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TCRAP04437 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.47□□□□□ -0.57
TCRAP04437 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.47□□□□□ -0.57
TCRAP04437 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.47□□□□□ -0.57
TCRAP04437 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.47□□□□□ -0.57
TCRAP04437 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TCRAP04437 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.47□□□□□ -0.57
TCRAP04437 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TCRAP04437 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TCRAP04437 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.47□□□□□ -0.57
TCRAP04437 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TCRAP04437 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms