Protein–RNA interactions for Protein: A8MX34

KRTAP29-1, Keratin-associated protein 29-1, humanhuman

Predicted RBP Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP29-1A8MX34 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 PCGF3-213ENST00000620529 1899 ntBASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 U82695.1-201ENST00000635752 1889 ntBASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 SDCCAG3P2-201ENST00000326105 1023 ntBASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 NDUFAB1P1-201ENST00000404262 460 ntBASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 AC079178.1-201ENST00000420915 656 ntBASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 MSRA-203ENST00000441698 788 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 RN7SL11P-201ENST00000471305 293 ntBASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 SERPINA13P-202ENST00000478994 924 ntBASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 AC091544.8-201ENST00000619490 361 ntBASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 AC100757.4-201ENST00000626934 759 ntBASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 AL138709.1-201ENST00000614840 1693 ntBASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 AC041040.2-201ENST00000622926 2899 ntBASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 GSN-215ENST00000545652 2428 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC9.34□□□□□ -0.91
KRTAP29-1A8MX34 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
KRTAP29-1A8MX34 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC9.34□□□□□ -0.92
KRTAP29-1A8MX34 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
KRTAP29-1A8MX34 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC9.33□□□□□ -0.92
KRTAP29-1A8MX34 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP29-1A8MX34 AC005840.4-201ENST00000541242 2494 ntBASIC9.33□□□□□ -0.92
KRTAP29-1A8MX34 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP29-1A8MX34 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP29-1A8MX34 TUBBP5-203ENST00000508529 1334 ntBASIC9.33□□□□□ -0.92
KRTAP29-1A8MX34 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP29-1A8MX34 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
KRTAP29-1A8MX34 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP29-1A8MX34 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP29-1A8MX34 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC9.33□□□□□ -0.92
KRTAP29-1A8MX34 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP29-1A8MX34 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP29-1A8MX34 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP29-1A8MX34 COCH-203ENST00000460581 2688 ntTSL 2 BASIC9.33□□□□□ -0.92
KRTAP29-1A8MX34 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
KRTAP29-1A8MX34 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP29-1A8MX34 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP29-1A8MX34 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP29-1A8MX34 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms