Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 IMPDH1P4-201ENST00000445028 1534 ntBASIC10.58□□□□□ -0.72
LINC01546A6NGU7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 PCDHB18P-202ENST00000526308 3197 ntBASIC10.57□□□□□ -0.72
LINC01546A6NGU7 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 DDC-214ENST00000622873 1839 ntTSL 3 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 AL645937.2-201ENST00000396808 931 ntBASIC10.57□□□□□ -0.72
LINC01546A6NGU7 AL353705.2-201ENST00000428243 662 ntBASIC10.57□□□□□ -0.72
LINC01546A6NGU7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 AC079776.4-201ENST00000511039 504 ntBASIC10.57□□□□□ -0.72
LINC01546A6NGU7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 PDPK2P-202ENST00000562415 1191 ntBASIC10.57□□□□□ -0.72
LINC01546A6NGU7 AC026150.2-201ENST00000564693 1156 ntBASIC10.57□□□□□ -0.72
LINC01546A6NGU7 AL049597.2-201ENST00000565575 961 ntBASIC10.57□□□□□ -0.72
LINC01546A6NGU7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 AL358472.4-201ENST00000633140 710 ntBASIC10.57□□□□□ -0.72
LINC01546A6NGU7 AC004840.1-201ENST00000636359 365 ntBASIC10.57□□□□□ -0.72
LINC01546A6NGU7 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 AC093525.8-201ENST00000624099 1342 ntBASIC10.57□□□□□ -0.72
LINC01546A6NGU7 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC10.57□□□□□ -0.72
LINC01546A6NGU7 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms