Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
CDC42P60953 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.83□□□□□ -0.2
CDC42P60953 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.83□□□□□ -0.2
CDC42P60953 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CDC42P60953 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CDC42P60953 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CDC42P60953 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.82□□□□□ -0.2
CDC42P60953 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.82□□□□□ -0.2
CDC42P60953 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CDC42P60953 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CDC42P60953 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.82□□□□□ -0.2
CDC42P60953 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.82□□□□□ -0.2
CDC42P60953 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.82□□□□□ -0.2
CDC42P60953 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CDC42P60953 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CDC42P60953 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.82□□□□□ -0.2
CDC42P60953 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.82□□□□□ -0.2
CDC42P60953 ACTG1P14-201ENST00000446382 1122 ntBASIC13.82□□□□□ -0.2
CDC42P60953 FDX1P1-201ENST00000449115 551 ntBASIC13.82□□□□□ -0.2
CDC42P60953 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.82□□□□□ -0.2
CDC42P60953 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.82□□□□□ -0.2
CDC42P60953 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.82□□□□□ -0.2
CDC42P60953 MIR6069-201ENST00000620069 79 ntBASIC13.82□□□□□ -0.2
CDC42P60953 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.82□□□□□ -0.2
CDC42P60953 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.82□□□□□ -0.2
CDC42P60953 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.82□□□□□ -0.2
CDC42P60953 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CDC42P60953 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.82□□□□□ -0.2
CDC42P60953 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.82□□□□□ -0.2
CDC42P60953 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.82□□□□□ -0.2
CDC42P60953 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.82□□□□□ -0.2
CDC42P60953 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CDC42P60953 Z97205.2-201ENST00000564697 1639 ntBASIC13.82□□□□□ -0.2
CDC42P60953 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CDC42P60953 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CDC42P60953 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CDC42P60953 AL035456.1-201ENST00000456064 1369 ntBASIC13.82□□□□□ -0.2
CDC42P60953 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CDC42P60953 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.82□□□□□ -0.2
CDC42P60953 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.82□□□□□ -0.2
CDC42P60953 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.82□□□□□ -0.2
CDC42P60953 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDC42P60953 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CDC42P60953 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CDC42P60953 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC42P60953 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC42P60953 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.81□□□□□ -0.2
CDC42P60953 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CDC42P60953 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC42P60953 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC42P60953 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDC42P60953 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.81□□□□□ -0.2
CDC42P60953 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.81□□□□□ -0.2
CDC42P60953 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC42P60953 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC42P60953 AC015922.1-201ENST00000421102 1152 ntBASIC13.81□□□□□ -0.2
CDC42P60953 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.81□□□□□ -0.2
CDC42P60953 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.81□□□□□ -0.2
CDC42P60953 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.81□□□□□ -0.2
CDC42P60953 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC42P60953 ALG1L8P-201ENST00000533887 760 ntBASIC13.81□□□□□ -0.2
CDC42P60953 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.81□□□□□ -0.2
CDC42P60953 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.81□□□□□ -0.2
CDC42P60953 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.81□□□□□ -0.2
CDC42P60953 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.81□□□□□ -0.2
CDC42P60953 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.81□□□□□ -0.2
CDC42P60953 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.81□□□□□ -0.2
CDC42P60953 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.81□□□□□ -0.2
CDC42P60953 AC003101.2-201ENST00000612557 442 ntBASIC13.81□□□□□ -0.2
CDC42P60953 BX640515.1-201ENST00000617215 977 ntBASIC13.81□□□□□ -0.2
CDC42P60953 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms