Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RFC3P40938 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.83□□□□□ -0.2
RFC3P40938 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RFC3P40938 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 RPL5P21-201ENST00000404620 815 ntBASIC13.83□□□□□ -0.2
RFC3P40938 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.83□□□□□ -0.2
RFC3P40938 Z93015.1-201ENST00000451718 390 ntBASIC13.83□□□□□ -0.2
RFC3P40938 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.83□□□□□ -0.2
RFC3P40938 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.83□□□□□ -0.2
RFC3P40938 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.83□□□□□ -0.2
RFC3P40938 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.83□□□□□ -0.2
RFC3P40938 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.83□□□□□ -0.2
RFC3P40938 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.83□□□□□ -0.2
RFC3P40938 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.83□□□□□ -0.2
RFC3P40938 AL118558.3-201ENST00000607414 1079 ntBASIC13.83□□□□□ -0.2
RFC3P40938 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.83□□□□□ -0.2
RFC3P40938 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.83□□□□□ -0.2
RFC3P40938 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RFC3P40938 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.83□□□□□ -0.2
RFC3P40938 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.83□□□□□ -0.2
RFC3P40938 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RFC3P40938 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.83□□□□□ -0.2
RFC3P40938 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.83□□□□□ -0.2
RFC3P40938 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RFC3P40938 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.83□□□□□ -0.2
RFC3P40938 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.83□□□□□ -0.2
RFC3P40938 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.83□□□□□ -0.2
RFC3P40938 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RFC3P40938 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.83□□□□□ -0.2
RFC3P40938 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RFC3P40938 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RFC3P40938 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.82□□□□□ -0.2
RFC3P40938 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RFC3P40938 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.82□□□□□ -0.2
RFC3P40938 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
RFC3P40938 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.82□□□□□ -0.2
RFC3P40938 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.82□□□□□ -0.2
RFC3P40938 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.82□□□□□ -0.2
RFC3P40938 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RFC3P40938 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 AL645937.2-201ENST00000396808 931 ntBASIC13.82□□□□□ -0.2
RFC3P40938 AC007969.1-201ENST00000433675 447 ntBASIC13.82□□□□□ -0.2
RFC3P40938 GOLGA2P4-201ENST00000441462 777 ntBASIC13.82□□□□□ -0.2
RFC3P40938 HOMER2P2-201ENST00000451621 847 ntBASIC13.82□□□□□ -0.2
RFC3P40938 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 AC022616.1-201ENST00000518688 554 ntBASIC13.82□□□□□ -0.2
RFC3P40938 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
RFC3P40938 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
RFC3P40938 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.82□□□□□ -0.2
RFC3P40938 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.82□□□□□ -0.2
RFC3P40938 RN7SL48P-201ENST00000579283 293 ntBASIC13.82□□□□□ -0.2
RFC3P40938 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.82□□□□□ -0.2
RFC3P40938 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RFC3P40938 AC244093.1-201ENST00000610837 814 ntBASIC13.82□□□□□ -0.2
RFC3P40938 MIR6787-201ENST00000616675 61 ntBASIC13.82□□□□□ -0.2
RFC3P40938 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RFC3P40938 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFC3P40938 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms