Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.46□□□□□ -0.26
CNOT4O95628 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
CNOT4O95628 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CNOT4O95628 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.45□□□□□ -0.26
CNOT4O95628 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CNOT4O95628 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.45□□□□□ -0.26
CNOT4O95628 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
CNOT4O95628 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.45□□□□□ -0.26
CNOT4O95628 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.45□□□□□ -0.26
CNOT4O95628 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.45□□□□□ -0.26
CNOT4O95628 LRRC59-203ENST00000576448 1531 ntBASIC13.45□□□□□ -0.26
CNOT4O95628 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 RNU1-114P-201ENST00000365297 166 ntBASIC13.45□□□□□ -0.26
CNOT4O95628 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CNOT4O95628 CD8B2-202ENST00000417670 633 ntBASIC13.45□□□□□ -0.26
CNOT4O95628 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.45□□□□□ -0.26
CNOT4O95628 RPL7P3-201ENST00000441388 714 ntBASIC13.45□□□□□ -0.26
CNOT4O95628 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.45□□□□□ -0.26
CNOT4O95628 AC007551.1-201ENST00000457394 519 ntBASIC13.45□□□□□ -0.26
CNOT4O95628 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
CNOT4O95628 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.45□□□□□ -0.26
CNOT4O95628 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.45□□□□□ -0.26
CNOT4O95628 AL583810.1-201ENST00000553344 1045 ntBASIC13.45□□□□□ -0.26
CNOT4O95628 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.45□□□□□ -0.26
CNOT4O95628 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.45□□□□□ -0.26
CNOT4O95628 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.45□□□□□ -0.26
CNOT4O95628 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.45□□□□□ -0.26
CNOT4O95628 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.45□□□□□ -0.26
CNOT4O95628 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CNOT4O95628 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CNOT4O95628 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CNOT4O95628 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.45□□□□□ -0.26
CNOT4O95628 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.45□□□□□ -0.26
CNOT4O95628 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CNOT4O95628 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CNOT4O95628 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.44□□□□□ -0.26
CNOT4O95628 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CNOT4O95628 PDIA3P1-201ENST00000471856 1510 ntBASIC13.44□□□□□ -0.26
CNOT4O95628 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.44□□□□□ -0.26
CNOT4O95628 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CNOT4O95628 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.44□□□□□ -0.26
CNOT4O95628 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CNOT4O95628 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.44□□□□□ -0.26
CNOT4O95628 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
CNOT4O95628 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.44□□□□□ -0.26
CNOT4O95628 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.44□□□□□ -0.26
CNOT4O95628 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CNOT4O95628 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.44□□□□□ -0.26
CNOT4O95628 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
CNOT4O95628 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.44□□□□□ -0.26
CNOT4O95628 FO681548.1-201ENST00000455617 1132 ntBASIC13.44□□□□□ -0.26
CNOT4O95628 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.44□□□□□ -0.26
CNOT4O95628 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.44□□□□□ -0.26
CNOT4O95628 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CNOT4O95628 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CNOT4O95628 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.44□□□□□ -0.26
CNOT4O95628 GNRHR2-203ENST00000581100 1187 ntBASIC13.44□□□□□ -0.26
CNOT4O95628 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.44□□□□□ -0.26
CNOT4O95628 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms