Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.72■□□□□ 0.11
BEST1O76090 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BEST1O76090 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST1O76090 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
BEST1O76090 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST1O76090 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST1O76090 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
BEST1O76090 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
BEST1O76090 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.72■□□□□ 0.11
BEST1O76090 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.71■□□□□ 0.11
BEST1O76090 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
BEST1O76090 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST1O76090 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST1O76090 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BEST1O76090 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BEST1O76090 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.71■□□□□ 0.11
BEST1O76090 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.71■□□□□ 0.11
BEST1O76090 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
BEST1O76090 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST1O76090 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
BEST1O76090 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST1O76090 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
BEST1O76090 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
BEST1O76090 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST1O76090 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.71■□□□□ 0.11
BEST1O76090 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
BEST1O76090 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.71■□□□□ 0.11
BEST1O76090 BTBD6P1-201ENST00000412176 1267 ntBASIC15.71■□□□□ 0.11
BEST1O76090 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.71■□□□□ 0.11
BEST1O76090 AL591846.1-201ENST00000451736 433 ntBASIC15.71■□□□□ 0.11
BEST1O76090 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.71■□□□□ 0.11
BEST1O76090 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST1O76090 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.71■□□□□ 0.11
BEST1O76090 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.71■□□□□ 0.11
BEST1O76090 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.71■□□□□ 0.11
BEST1O76090 AC005695.3-201ENST00000614522 232 ntBASIC15.71■□□□□ 0.11
BEST1O76090 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.71■□□□□ 0.11
BEST1O76090 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.71■□□□□ 0.11
BEST1O76090 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.71■□□□□ 0.11
BEST1O76090 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.71■□□□□ 0.11
BEST1O76090 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST1O76090 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.71■□□□□ 0.11
BEST1O76090 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST1O76090 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST1O76090 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST1O76090 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BEST1O76090 MTHFR-210ENST00000641407 2387 ntBASIC15.71■□□□□ 0.11
BEST1O76090 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
BEST1O76090 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.71■□□□□ 0.1
BEST1O76090 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
BEST1O76090 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
BEST1O76090 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.71■□□□□ 0.1
BEST1O76090 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
BEST1O76090 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.71■□□□□ 0.1
BEST1O76090 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST1O76090 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST1O76090 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BEST1O76090 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.7■□□□□ 0.1
BEST1O76090 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.7■□□□□ 0.1
BEST1O76090 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
BEST1O76090 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST1O76090 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.7■□□□□ 0.1
BEST1O76090 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST1O76090 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.7■□□□□ 0.1
BEST1O76090 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BEST1O76090 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BEST1O76090 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
BEST1O76090 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
BEST1O76090 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST1O76090 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST1O76090 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST1O76090 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.7■□□□□ 0.1
BEST1O76090 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
BEST1O76090 HSPB1P2-201ENST00000448722 546 ntBASIC15.7■□□□□ 0.1
BEST1O76090 GCOM2-201ENST00000509133 1104 ntBASIC15.7■□□□□ 0.1
BEST1O76090 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.7■□□□□ 0.1
BEST1O76090 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.7■□□□□ 0.1
BEST1O76090 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.7■□□□□ 0.1
BEST1O76090 AC091271.1-201ENST00000611877 1162 ntBASIC15.7■□□□□ 0.1
BEST1O76090 AC244157.2-201ENST00000616239 1006 ntBASIC15.7■□□□□ 0.1
BEST1O76090 MIR6869-201ENST00000619434 62 ntBASIC15.7■□□□□ 0.1
BEST1O76090 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST1O76090 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.7■□□□□ 0.1
BEST1O76090 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST1O76090 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BEST1O76090 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
BEST1O76090 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST1O76090 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST1O76090 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
BEST1O76090 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BEST1O76090 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST1O76090 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
BEST1O76090 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.7■□□□□ 0.1
BEST1O76090 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
BEST1O76090 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST1O76090 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
BEST1O76090 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BEST1O76090 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BEST1O76090 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BEST1O76090 LINC02228-204ENST00000642115 2962 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms