Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NCKAP1Q9Y2A7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1Q9Y2A7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1Q9Y2A7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1Q9Y2A7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1Q9Y2A7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1Q9Y2A7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1Q9Y2A7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1Q9Y2A7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1Q9Y2A7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCKAP1Q9Y2A7 AL137783.1-201ENST00000623494 1896 ntBASIC15.1■□□□□ 0.01
NCKAP1Q9Y2A7 AP000593.2-201ENST00000542775 1433 ntBASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 AL354877.1-201ENST00000424412 413 ntBASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 BX284668.4-201ENST00000453917 508 ntBASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 SERPINA13P-202ENST00000478994 924 ntBASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 AP003171.2-201ENST00000528208 925 ntBASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 AL451050.2-201ENST00000606967 682 ntBASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 REXO1L4P-201ENST00000605109 1937 ntBASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.09■□□□□ 0.01
NCKAP1Q9Y2A7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.08■□□□□ 0.01
NCKAP1Q9Y2A7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NCKAP1Q9Y2A7 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NCKAP1Q9Y2A7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
NCKAP1Q9Y2A7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
NCKAP1Q9Y2A7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.08■□□□□ 0.01
NCKAP1Q9Y2A7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.08■□□□□ 0.01
NCKAP1Q9Y2A7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NCKAP1Q9Y2A7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
NCKAP1Q9Y2A7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0.01
NCKAP1Q9Y2A7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
NCKAP1Q9Y2A7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 AC005077.2-201ENST00000449786 690 ntBASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 AL136301.1-201ENST00000615830 422 ntBASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 AC138649.2-201ENST00000615886 705 ntBASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
NCKAP1Q9Y2A7 KRT8P29-201ENST00000420409 1371 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms