Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 TSSK5P-201ENST00000423978 907 ntBASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 ZNF890P-202ENST00000530367 1156 ntBASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 AC139530.3-201ENST00000620344 690 ntBASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
CLIP4Q8N3C7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 REXO1L4P-201ENST00000605109 1937 ntBASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 METTL21AP1-201ENST00000438852 635 ntBASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 AC009407.1-201ENST00000568958 598 ntBASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLIP4Q8N3C7 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms