Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC188H7C350 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 SDHAP3-202ENST00000515467 728 ntBASIC15.7■□□□□ 0.1
CCDC188H7C350 KRT18P58-201ENST00000527480 1120 ntBASIC15.7■□□□□ 0.1
CCDC188H7C350 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC188H7C350 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC188H7C350 AC010336.2-201ENST00000564226 506 ntBASIC15.7■□□□□ 0.1
CCDC188H7C350 AC051619.7-201ENST00000568314 623 ntBASIC15.7■□□□□ 0.1
CCDC188H7C350 AC004835.2-201ENST00000603762 682 ntBASIC15.7■□□□□ 0.1
CCDC188H7C350 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC188H7C350 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCDC188H7C350 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC188H7C350 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC188H7C350 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC188H7C350 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC188H7C350 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CCDC188H7C350 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC188H7C350 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC188H7C350 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC188H7C350 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCDC188H7C350 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCDC188H7C350 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CCDC188H7C350 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC188H7C350 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC188H7C350 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CCDC188H7C350 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC188H7C350 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC188H7C350 YBX1P5-201ENST00000509441 847 ntBASIC15.69■□□□□ 0.1
CCDC188H7C350 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.69■□□□□ 0.1
CCDC188H7C350 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC188H7C350 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC188H7C350 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC188H7C350 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC188H7C350 AL109936.8-201ENST00000641772 604 ntBASIC15.69■□□□□ 0.1
CCDC188H7C350 AC020910.6-201ENST00000623084 1459 ntBASIC15.69■□□□□ 0.1
CCDC188H7C350 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC188H7C350 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC188H7C350 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC188H7C350 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC188H7C350 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC188H7C350 TUBB3P1-201ENST00000405796 1332 ntBASIC15.68■□□□□ 0.1
CCDC188H7C350 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC188H7C350 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC188H7C350 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC188H7C350 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC188H7C350 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC188H7C350 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC188H7C350 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CCDC188H7C350 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC188H7C350 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC188H7C350 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC188H7C350 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC188H7C350 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC188H7C350 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC188H7C350 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC188H7C350 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC188H7C350 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC188H7C350 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CCDC188H7C350 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC188H7C350 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC188H7C350 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC188H7C350 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms