Protein–RNA interactions for Protein: Q9Y3F1

Putative TAP2-associated 6.5 kDa polypeptide, humanhuman

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9Y3F1 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Q9Y3F1 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Q9Y3F1 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Q9Y3F1 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Q9Y3F1 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.41■□□□□ 0.22
Q9Y3F1 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Q9Y3F1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Q9Y3F1 AC009560.1-201ENST00000620208 434 ntBASIC16.41■□□□□ 0.22
Q9Y3F1 KRT8P31-201ENST00000504812 1408 ntBASIC16.41■□□□□ 0.22
Q9Y3F1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Q9Y3F1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.41■□□□□ 0.22
Q9Y3F1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Q9Y3F1 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Q9Y3F1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Q9Y3F1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Q9Y3F1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Q9Y3F1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Q9Y3F1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Q9Y3F1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Q9Y3F1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Q9Y3F1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.4■□□□□ 0.22
Q9Y3F1 AC013726.1-201ENST00000563747 2285 ntBASIC16.4■□□□□ 0.22
Q9Y3F1 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.4■□□□□ 0.22
Q9Y3F1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.4■□□□□ 0.22
Q9Y3F1 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Q9Y3F1 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.4■□□□□ 0.22
Q9Y3F1 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Q9Y3F1 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.4■□□□□ 0.22
Q9Y3F1 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Q9Y3F1 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.4■□□□□ 0.22
Q9Y3F1 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.4■□□□□ 0.22
Q9Y3F1 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.4■□□□□ 0.22
Q9Y3F1 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.4■□□□□ 0.22
Q9Y3F1 AC114947.1-202ENST00000514136 344 ntBASIC16.4■□□□□ 0.22
Q9Y3F1 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.4■□□□□ 0.22
Q9Y3F1 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.4■□□□□ 0.22
Q9Y3F1 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.4■□□□□ 0.22
Q9Y3F1 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.4■□□□□ 0.22
Q9Y3F1 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Q9Y3F1 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.4■□□□□ 0.22
Q9Y3F1 MIR6842-201ENST00000612539 65 ntBASIC16.4■□□□□ 0.22
Q9Y3F1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Q9Y3F1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.4■□□□□ 0.22
Q9Y3F1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Q9Y3F1 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.4■□□□□ 0.22
Q9Y3F1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Q9Y3F1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Q9Y3F1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Q9Y3F1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Q9Y3F1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Q9Y3F1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Q9Y3F1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Q9Y3F1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.4■□□□□ 0.22
Q9Y3F1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Q9Y3F1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Q9Y3F1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Q9Y3F1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.4■□□□□ 0.22
Q9Y3F1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Q9Y3F1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Q9Y3F1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Q9Y3F1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Q9Y3F1 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Q9Y3F1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Q9Y3F1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
Q9Y3F1 KRT8P28-201ENST00000433288 1390 ntBASIC16.39■□□□□ 0.21
Q9Y3F1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Q9Y3F1 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Q9Y3F1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Q9Y3F1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Q9Y3F1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.39■□□□□ 0.21
Q9Y3F1 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Q9Y3F1 AP000356.3-201ENST00000382243 753 ntBASIC16.39■□□□□ 0.21
Q9Y3F1 AL583805.1-201ENST00000391389 531 ntBASIC16.39■□□□□ 0.21
Q9Y3F1 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.39■□□□□ 0.21
Q9Y3F1 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.39■□□□□ 0.21
Q9Y3F1 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.39■□□□□ 0.21
Q9Y3F1 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Q9Y3F1 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.39■□□□□ 0.21
Q9Y3F1 CHCHD2P9-201ENST00000461726 456 ntBASIC16.39■□□□□ 0.21
Q9Y3F1 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Q9Y3F1 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.39■□□□□ 0.21
Q9Y3F1 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.39■□□□□ 0.21
Q9Y3F1 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Q9Y3F1 AC135983.4-201ENST00000564116 1262 ntBASIC16.39■□□□□ 0.21
Q9Y3F1 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.39■□□□□ 0.21
Q9Y3F1 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.39■□□□□ 0.21
Q9Y3F1 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.39■□□□□ 0.21
Q9Y3F1 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Q9Y3F1 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.39■□□□□ 0.21
Q9Y3F1 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.39■□□□□ 0.21
Q9Y3F1 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Q9Y3F1 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Q9Y3F1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Q9Y3F1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Q9Y3F1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.39■□□□□ 0.21
Q9Y3F1 SSR4P1-203ENST00000599569 2260 ntBASIC16.39■□□□□ 0.21
Q9Y3F1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Q9Y3F1 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.39■□□□□ 0.21
Q9Y3F1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Q9Y3F1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 313.3 ms