Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 PPP6R2P1-201ENST00000450880 1275 ntBASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 AC112482.1-201ENST00000492080 688 ntBASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 AL138828.2-201ENST00000615812 383 ntBASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 AGGF1P1-201ENST00000509500 2073 ntBASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC10.42□□□□□ -0.74
CDC42SE2Q9NRR3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms