Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.05■□□□□ 0.48
RTN4Q9NQC3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 AL592287.1-201ENST00000637598 2074 ntTSL 5 BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 AC023590.1-203ENST00000449065 411 ntTSL 3 BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 AC008667.4-201ENST00000607370 168 ntBASIC18.04■□□□□ 0.48
RTN4Q9NQC3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4Q9NQC3 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 HSPE1P27-201ENST00000430808 296 ntBASIC18.03■□□□□ 0.48
RTN4Q9NQC3 SAPCD2P3-201ENST00000455031 850 ntBASIC18.03■□□□□ 0.48
RTN4Q9NQC3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 AL139353.2-201ENST00000549844 699 ntTSL 3 BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 AC022960.2-201ENST00000616300 666 ntBASIC18.03■□□□□ 0.48
RTN4Q9NQC3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 AC006213.5-201ENST00000619673 288 ntBASIC18.03■□□□□ 0.48
RTN4Q9NQC3 AC087821.1-201ENST00000623639 567 ntBASIC18.03■□□□□ 0.48
RTN4Q9NQC3 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 AC097534.2-203ENST00000609900 1921 ntBASIC18.03■□□□□ 0.48
RTN4Q9NQC3 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 AL031595.1-201ENST00000623969 4709 ntBASIC18.03■□□□□ 0.48
RTN4Q9NQC3 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.03■□□□□ 0.48
RTN4Q9NQC3 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms