RNA–Protein interactions for RNA: ENST00000549844.5

AL139353.2-201, humanhuman

TSL 3 BASIC

Gene AL139353.2, Length 699 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139353.2-201ENST00000549844 CHIC1Q5VXU3 224 aa28.1■■■□□ 2.09
AL139353.2-201ENST00000549844 AEBP2Q6ZN18 517 aaPredicted RBP27.83■■■□□ 2.05
AL139353.2-201ENST00000549844 PHF23Q9BUL5 403 aaPredicted RBP24.76■■□□□ 1.55
AL139353.2-201ENST00000549844 NISCHQ9Y2I1 1504 aa24.53■■□□□ 1.52
AL139353.2-201ENST00000549844 SENP3Q9H4L4 574 aaPredicted RBP23.57■■□□□ 1.36
AL139353.2-201ENST00000549844 PLPPR3Q6T4P5 718 aa23.27■■□□□ 1.32
AL139353.2-201ENST00000549844 CCDC180Q9P1Z9 1646 aa22.01■■□□□ 1.11
AL139353.2-201ENST00000549844 ABCC9O60706 1549 aa21.8■■□□□ 1.08
AL139353.2-201ENST00000549844 FOXD1Q16676 465 aa21.71■■□□□ 1.07
AL139353.2-201ENST00000549844 ADRA2BP18089 450 aa21.69■■□□□ 1.06
AL139353.2-201ENST00000549844 PPP6R1Q9UPN7 881 aa21.56■■□□□ 1.04
AL139353.2-201ENST00000549844 KCNA4P22459 653 aa21.09■□□□□ 0.97
AL139353.2-201ENST00000549844 RB1CC1Q8TDY2 1594 aa20.85■□□□□ 0.93
AL139353.2-201ENST00000549844 EHMT2Q96KQ7 1210 aa20.77■□□□□ 0.92
AL139353.2-201ENST00000549844 PIAS4Q8N2W9 510 aaPredicted RBP20.75■□□□□ 0.91
AL139353.2-201ENST00000549844 NACADO15069 1562 aa20.75■□□□□ 0.91
AL139353.2-201ENST00000549844 PPP4R3CPQ6ZMV5 832 aa20.6■□□□□ 0.89
AL139353.2-201ENST00000549844 MYO15BQ96JP2 1530 aa20.53■□□□□ 0.88
AL139353.2-201ENST00000549844 UNC13AQ9UPW8 1703 aa20.5■□□□□ 0.87
AL139353.2-201ENST00000549844 DCAF8L2P0C7V8 631 aa20.5■□□□□ 0.87
AL139353.2-201ENST00000549844 DNAJC5BQ9UF47 199 aa20.41■□□□□ 0.86
AL139353.2-201ENST00000549844 NCBP3Q53F19 620 aaKnown RBP20.39■□□□□ 0.85
AL139353.2-201ENST00000549844 ZCCHC6Q5VYS8 1495 aaKnown RBP20.36■□□□□ 0.85
AL139353.2-201ENST00000549844 SLC4A1APQ9BWU0 796 aaKnown RBP20.31■□□□□ 0.84
AL139353.2-201ENST00000549844 DCAF1Q9Y4B6 1507 aa20.31■□□□□ 0.84
AL139353.2-201ENST00000549844 BICRAQ9NZM4 1560 aa20.3■□□□□ 0.84
AL139353.2-201ENST00000549844 PABPN1Q86U42 306 aaKnown RBP eCLIP20.29■□□□□ 0.84
AL139353.2-201ENST00000549844 CSRNP3Q8WYN3 585 aa20.03■□□□□ 0.8
AL139353.2-201ENST00000549844 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
AL139353.2-201ENST00000549844 SCRIBQ14160 1630 aa19.99■□□□□ 0.79
AL139353.2-201ENST00000549844 NPM3O75607 178 aaKnown RBP19.99■□□□□ 0.79
AL139353.2-201ENST00000549844 SCAF1Q9H7N4 1312 aaKnown RBP19.9■□□□□ 0.78
AL139353.2-201ENST00000549844 CNKSR2Q8WXI2 1034 aa19.84■□□□□ 0.77
AL139353.2-201ENST00000549844 CC2D2AQ9P2K1 1620 aa19.76■□□□□ 0.75
AL139353.2-201ENST00000549844 EIF4G1Q04637 1599 aaKnown RBP19.74■□□□□ 0.75
AL139353.2-201ENST00000549844 MSH5O43196 834 aa19.74■□□□□ 0.75
AL139353.2-201ENST00000549844 CECR2Q9BXF3 1484 aa19.64■□□□□ 0.73
AL139353.2-201ENST00000549844 ZBTB22O15209 634 aa19.38■□□□□ 0.69
AL139353.2-201ENST00000549844 MAPK8IP2Q13387 824 aaPredicted RBP19.36■□□□□ 0.69
AL139353.2-201ENST00000549844 RNF216Q9NWF9 866 aaPredicted RBP19.21■□□□□ 0.67
AL139353.2-201ENST00000549844 FOXD4L1Q9NU39 408 aa19.2■□□□□ 0.66
AL139353.2-201ENST00000549844 NCAPD3P42695 1498 aa19.15■□□□□ 0.66
AL139353.2-201ENST00000549844 SMARCA4P51532 1647 aa19.13■□□□□ 0.65
AL139353.2-201ENST00000549844 ATAD2BQ9ULI0 1458 aa19.09■□□□□ 0.65
AL139353.2-201ENST00000549844 SMARCA2P51531 1590 aa19.05■□□□□ 0.64
AL139353.2-201ENST00000549844 HMGXB3Q12766 1538 aa19.03■□□□□ 0.64
AL139353.2-201ENST00000549844 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.63
AL139353.2-201ENST00000549844 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
AL139353.2-201ENST00000549844 DMRT2Q9Y5R5 561 aa18.92■□□□□ 0.62
AL139353.2-201ENST00000549844 MROH2BQ7Z745 1585 aa18.9■□□□□ 0.62
AL139353.2-201ENST00000549844 BAZ1BQ9UIG0 1483 aaKnown RBP18.88■□□□□ 0.61
AL139353.2-201ENST00000549844 HOXD11P31277 338 aaPredicted RBP18.87■□□□□ 0.61
AL139353.2-201ENST00000549844 NESP48681 1621 aa18.8■□□□□ 0.6
AL139353.2-201ENST00000549844 CUX2O14529 1486 aa18.78■□□□□ 0.6
AL139353.2-201ENST00000549844 ERCC6Q03468 1493 aa18.78■□□□□ 0.6
AL139353.2-201ENST00000549844 LAMC3Q9Y6N6 1575 aa18.7■□□□□ 0.58
AL139353.2-201ENST00000549844 WIZO95785 1651 aa18.69■□□□□ 0.58
AL139353.2-201ENST00000549844 DNAJC5Q9H3Z4 198 aa18.64■□□□□ 0.57
AL139353.2-201ENST00000549844 THOC2Q8NI27 1593 aaKnown RBP18.64■□□□□ 0.57
AL139353.2-201ENST00000549844 SLC4A2P04920 1241 aa18.62■□□□□ 0.57
AL139353.2-201ENST00000549844 KIF21AQ7Z4S6 1674 aa18.62■□□□□ 0.57
AL139353.2-201ENST00000549844 PDS5BQ9NTI5 1447 aa18.54■□□□□ 0.56
AL139353.2-201ENST00000549844 CADPSQ9ULU8 1353 aa18.54■□□□□ 0.56
AL139353.2-201ENST00000549844 RSF1Q96T23 1441 aaPredicted RBP18.53■□□□□ 0.56
AL139353.2-201ENST00000549844 MYCNP04198 464 aaPredicted RBP18.5■□□□□ 0.55
AL139353.2-201ENST00000549844 ATXN8OSP0DMR3 200 aa18.46■□□□□ 0.55
AL139353.2-201ENST00000549844 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
AL139353.2-201ENST00000549844 MRC2Q9UBG0 1479 aa18.39■□□□□ 0.53
AL139353.2-201ENST00000549844 CFTRP13569 1480 aa18.38■□□□□ 0.53
AL139353.2-201ENST00000549844 WDR62O43379 1518 aa18.38■□□□□ 0.53
AL139353.2-201ENST00000549844 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.52
AL139353.2-201ENST00000549844 CEP164Q9UPV0 1460 aa18.33■□□□□ 0.52
AL139353.2-201ENST00000549844 PRDM2Q13029 1718 aa18.3■□□□□ 0.52
AL139353.2-201ENST00000549844 CCDC88BA6NC98 1476 aa18.23■□□□□ 0.51
AL139353.2-201ENST00000549844 URB2Q14146 1524 aaKnown RBP18.2■□□□□ 0.5
AL139353.2-201ENST00000549844 DCAF8L1A6NGE4 600 aa18.18■□□□□ 0.5
AL139353.2-201ENST00000549844 FKBP8Q14318 412 aa18.13■□□□□ 0.49
AL139353.2-201ENST00000549844 AMER1Q5JTC6 1135 aaPredicted RBP18.11■□□□□ 0.49
AL139353.2-201ENST00000549844 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.09■□□□□ 0.49
AL139353.2-201ENST00000549844 RTN4Q9NQC3 1192 aaKnown RBP18.03■□□□□ 0.48
AL139353.2-201ENST00000549844 TOPBP1Q92547 1522 aa18.01■□□□□ 0.47
AL139353.2-201ENST00000549844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.99■□□□□ 0.47
AL139353.2-201ENST00000549844 HNRNPUL2Q1KMD3 747 aaKnown RBP17.99■□□□□ 0.47
AL139353.2-201ENST00000549844 ABCC8Q09428 1581 aa17.96■□□□□ 0.47
AL139353.2-201ENST00000549844 DNMBPQ6XZF7 1577 aa17.96■□□□□ 0.47
AL139353.2-201ENST00000549844 IFT140Q96RY7 1462 aa17.96■□□□□ 0.47
AL139353.2-201ENST00000549844 ZNF608Q9ULD9 1512 aaPredicted RBP17.94■□□□□ 0.46
AL139353.2-201ENST00000549844 SAMD1Q6SPF0 538 aaPredicted RBP17.94■□□□□ 0.46
AL139353.2-201ENST00000549844 TARBP1Q13395 1621 aaKnown RBP17.9■□□□□ 0.46
AL139353.2-201ENST00000549844 OSCARQ8IYS5 282 aa17.89■□□□□ 0.45
AL139353.2-201ENST00000549844 EIF4G3O43432 1585 aaKnown RBP17.87■□□□□ 0.45
AL139353.2-201ENST00000549844 ATF5Q9Y2D1 282 aaPredicted RBP17.86■□□□□ 0.45
AL139353.2-201ENST00000549844 POLA1P09884 1462 aaPredicted RBP17.83■□□□□ 0.45
AL139353.2-201ENST00000549844 SLC24A1O60721 1099 aa17.8■□□□□ 0.44
AL139353.2-201ENST00000549844 U3KPZ7 1027 aaPredicted RBP17.8■□□□□ 0.44
AL139353.2-201ENST00000549844 TRIM41Q8WV44 630 aa17.78■□□□□ 0.44
AL139353.2-201ENST00000549844 AQRO60306 1485 aaKnown RBP eCLIP17.77■□□□□ 0.44
AL139353.2-201ENST00000549844 CUX1P39880 1505 aa17.76■□□□□ 0.43
AL139353.2-201ENST00000549844 CHD1O14646 1710 aa17.75■□□□□ 0.43
AL139353.2-201ENST00000549844 RAD54L2Q9Y4B4 1467 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms