Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 PPA1-206ENST00000625364 644 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC7Q96M83 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC7Q96M83 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC7Q96M83 AMT-204ENST00000427987 1646 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC7Q96M83 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC7Q96M83 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 ING5-213ENST00000636051 4199 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC7Q96M83 AC011840.2-201ENST00000563063 1520 ntBASIC20.88■□□□□ 0.93
CCDC7Q96M83 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC7Q96M83 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC7Q96M83 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC7Q96M83 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC7Q96M83 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC7Q96M83 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC7Q96M83 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC7Q96M83 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC7Q96M83 TLE1P1-201ENST00000422965 589 ntBASIC20.87■□□□□ 0.93
CCDC7Q96M83 CALR4P-201ENST00000431943 946 ntBASIC20.87■□□□□ 0.93
CCDC7Q96M83 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC7Q96M83 MESTP3-201ENST00000503460 968 ntBASIC20.87■□□□□ 0.93
CCDC7Q96M83 AHRR-211ENST00000515206 462 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC7Q96M83 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC7Q96M83 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC7Q96M83 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC7Q96M83 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC7Q96M83 AC097359.2-201ENST00000604992 2389 ntBASIC20.87■□□□□ 0.93
CCDC7Q96M83 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
CCDC7Q96M83 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC7Q96M83 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC7Q96M83 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC7Q96M83 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC7Q96M83 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC7Q96M83 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC7Q96M83 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC7Q96M83 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC7Q96M83 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC7Q96M83 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC7Q96M83 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC7Q96M83 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CCDC7Q96M83 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC7Q96M83 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC7Q96M83 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCDC7Q96M83 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC7Q96M83 INE2-201ENST00000630399 1874 ntBASIC20.86■□□□□ 0.93
CCDC7Q96M83 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CCDC7Q96M83 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC7Q96M83 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC7Q96M83 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC7Q96M83 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC7Q96M83 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC7Q96M83 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC7Q96M83 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC7Q96M83 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC7Q96M83 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC7Q96M83 AC007969.1-201ENST00000433675 447 ntBASIC20.86■□□□□ 0.93
CCDC7Q96M83 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC7Q96M83 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC7Q96M83 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC7Q96M83 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC7Q96M83 AC131206.1-201ENST00000538078 1211 ntBASIC20.86■□□□□ 0.93
CCDC7Q96M83 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC7Q96M83 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC7Q96M83 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC7Q96M83 AC138466.3-201ENST00000619983 221 ntBASIC20.86■□□□□ 0.93
CCDC7Q96M83 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC7Q96M83 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC7Q96M83 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC7Q96M83 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC7Q96M83 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC7Q96M83 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC7Q96M83 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC7Q96M83 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC7Q96M83 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC7Q96M83 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC7Q96M83 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC7Q96M83 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC7Q96M83 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CCDC7Q96M83 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC7Q96M83 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
CCDC7Q96M83 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC7Q96M83 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC7Q96M83 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
CCDC7Q96M83 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC7Q96M83 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC7Q96M83 MPI-203ENST00000535694 1523 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC7Q96M83 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC7Q96M83 AC006001.1-201ENST00000325130 474 ntBASIC20.85■□□□□ 0.93
CCDC7Q96M83 GUK1-206ENST00000366723 845 ntTSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms